Mitochondrial DNA Origin of Indigenous Malagasy Chicken Implication for a Functional Polymorphism at the Mx Gene

文献类型： 外文期刊

第一作者： Razafindraibe, Hanta

作者： Razafindraibe, Hanta;Mobegi, Victor A.;Ommeh, Sheila C.;Bjornstad, Gro;Hanotte, Olivier;Jianlin, Han;Rakotondravao;Jianlin, Han

作者机构：

关键词： Madagascar;chicken;Indonesia;Africa

期刊名称：ANIMAL BIODIVERSITY AND EMERGING DISEASES: PREDICTION AND PREVENTION （ 影响因子：5.691； ）

ISSN： 0077-8923

年卷期： 2008 年 1149 卷

页码：

收录情况： SCI

摘要： We report the mitochondrial DNA (mtDNA) characterization of 77 indigenous chickens (fighting and meat birds) from Madagascar, using DNA sequences of the first hypervariable segment of the D-loop. Comparison with reference samples from the African continent and Asia revealed two mtDNA haplogroups, suggesting a dual geographic and genetic origin for the indigenous Malagasy chickens. The most common haplogroup was present in 65 individuals of the two types; it is likely of Indonesian origin. The second haplogroup was observed in 12 fighting birds and meat chickens; it could be of African continental origin and/or the result of recent introgression with commercial lines. We further studied a G/A single nucleotide polymorphism at nucleotide position 1892 bp of the coding sequence of the Mx gene that is reported to be one of the candidate susceptible/resistant genes to viral infection in chicken. Our results indicate the "Susceptible" allele G is the most common with frequencies of 65% and 70% in Malagasy fighting and meat chickens, respectively. However, the allelic frequency difference between the two types of chickens is not significant (P > 0.05). These results are discussed in light of our current linguistic and archaeological knowledge on the origin of indigenous Malagasy chickens.

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