Genetic characterization of a novel Tib-derived variant of soybean Kunitz trypsin inhibitor detected in wild soybean (Glycine soja)

文献类型: 外文期刊

第一作者: Wang, KJ

作者: Wang, KJ;Yamashita, T;Watanabe, M;Takahata, Y

作者机构:

关键词: soybean Kunitz trypsin inhibitor;polymorphism;gene sequence;soybean;wild soybean

期刊名称:GENOME ( 影响因子:2.166; 五年影响因子:2.474 )

ISSN: 0831-2796

年卷期: 2004 年 47 卷 1 期

页码:

收录情况: SCI

摘要: A novel variant of soybean Kunitz trypsin inhibitor (SKTI) was detected in 530 lines of wild soybean (Glycine soja). This variant showed an intermediate electrophoretic mobility between the Tia and Tic types. In isoelectric focusing polyacrylamide gel electrophoresis gels containing urea, this variant had a similar isoelectric point as that of Tia. The genetic analysis of SKTI bands in F-2 seeds from crosses of the new variant type with Tia or Tic type showed that this variant type is controlled by a codominant allele at the SKTI locus. We propose the genetic symbol Tif for this novel variant. When the nucleotide sequence of the Tif gene was compared with those of other types of SKTI genes (Tia, Tib, and Tic), the sequence of Tif was identical to that of Tib with the exception of one A-->G transitional mutation occurring at position 676 of Tif. This mutation resulted in an amino acid change from Lys to Glu at the 178 residue. These results suggest that this variant is derived from Tib through a point mutation. In addition, we settled an inconsistency in the number of amino acid differences between Tia and Tib (eight or nine). Analysis of nucleotide and amino acid sequences revealed that Tib was different from Tia by nine amino acids.

分类号:

  • 相关文献

[1]Entity evidence for differentiation between Tia and Tib types of soybean Kunitz trypsin inhibitor: detection of a novel transitional variant type between Tia and Tib in wild soybean (Glycine soja Sieb. & Zucc.). Wang, KJ,Takahata, Y,Kono, Y,Kaizuma, N. 2005

[2]Single nucleotide mutation leading to an amino acid substitution in the variant Tik soybean Kunitz trypsin inhibitor (SKTI) identified in Chinese wild soybean (Glycine soja Sieb. & Zucc.). Wang, Ke-Jing,Li, Xiang-Hua,Yamashita, Tetsuro,Takahata, Yoshihito.

[3]Leaf shape polymorphism and its relationship to other characteristics of wild soybean (Glycine soja) in China. Yan, Xuefei,Liu, Shuyuan,Li, Jiandong,Guo, Wei,Sun, Bei,Zhang, Ling,Liu, Xiaodong,Zhao, Hongkun,Gao, Min. 2014

[4]Identification and characterization of the Enterobacter complex causing mulberry (Morus alba) wilt disease in China. Wang, Guo-Fen,Xie, Guan-Lin,Zhu, Bo,Wang, Guo-Fen,Huang, Jun-Sheng,Liu, Bo,Kawicha, Praphat,Benyon, Lesley,Duan, Yong-Ping.

[5]The photosynthetic stress responses of five pepper species are consistent with their genetic variability. Zou, X. X.,Ou, L. J.,Zou, X. X..

[6]Study of the 49 kDa excretory-secretory protein gene of Trichinella nativa and Trichinella spiralis. Zheng, B. L.,Xiao, L. H.,Wang, X. R.,Li, D. M.,Lu, Y. X.,Zhang, Y.,Yan, Q. B.,Song, M. X.. 2007

[7]Association mapping of yield-related traits and SSR markers in wild soybean (Glycine sofa Sieb. and Zucc.). Hu, Zhenbin,Zhang, Dan,Zhang, Guozheng,Kan, Guizhen,Hong, Delin,Yu, Deyue,Hu, Zhenbin,Zhang, Dan. 2014

[8]Genetic characterization and gene flow in different geographical-distance neighbouring natural populations of wild soybean (Glycine soja Sieb. & Zucc.) and implications for protection from GM soybeans. Wang, Ke-Jing,Li, Xiang-Hua.

[9]The identification of presence/absence variants associated with the apparent differences of growth period structures between cultivated and wild soybeans. Li Yan-fei,Hong Hui-long,Li Ying-hui,Ma Yan-song,Chang Ru-zhen,Qiu Li-juan,Hong Hui-long,Ma Yan-song.

[10]Population structure of the wild soybean (Glycine soja) in China: implications from microsatellite analyses. Li, Yinghui,Qiu, Lijuan,Guo, Juan,Wang, Yunsheng,Chen, Jianjun,Wang, Ying,Liu, Yifei,Huang, Hongwen.

[11]Genome-Wide Association Study of Resistance to Soybean Cyst Nematode (Heterodera glycines) HG Type 2.5.7 in Wild Soybean (Glycine soja). Zhang, Hengyou,Kofsky, Janice,Song, Bao-Hua,Li, Chunying,Davis, Eric L.,Wang, Jinshe,Griffin, Joshua D.. 2016

[12]A preliminary comparative evaluation of genetic diversity between Chinese and Japanese wild soybean (Glycine soja) germplasm pools using SSR markers. Wang, Ke-Jing,Takahata, Yoshihito. 2007

[13]Categories and components of soyasaponin in the Chinese wild soybean (Glycine soja) genetic resource collection. Takahashi, Yuya,Li, Xiang-Hua,Wang, Ke-Jing,Tsukamoto, Chigen.

[14]Identification of MicroRNAs in Wild Soybean (Glycine soja). Chen, Rui,Hu, Zheng,Zhang, Hui. 2009

[15]A single origin and moderate bottleneck during domestication of soybean (Glycine max): implications from microsatellites and nucleotide sequences. Guo, Juan,Wang, Yunsheng,Song, Chi,Zhou, Jianfeng,Huang, Hongwen,Wang, Ying,Qiu, Lijuan. 2010

[16]Genetic diversity and geographical peculiarity of Tibetan wild soybean (Glycine soja). Wang, Ke-Jing,Li, Xiang-Hua. 2012

[17]The possible origin of thick stem in Chinese wild soybean (Glycine soja). Wang, Ke-Jing,Li, Xiang-Hua. 2014

[18]Genetic diversity and gene flow dynamics revealed in the rare mixed populations of wild soybean (Glycine soja) and semi-wild type (Glycine gracilis) in China. Wang, Ke-Jing,Li, Xiang-Hua. 2013

[19]Interspecific gene flow and the origin of semi-wild soybean revealed by capturing the natural occurrence of introgression between wild and cultivated soybean populations. Wang, K-J.,Li, X-H.. 2011

[20]Identification of a novel variant lacking group A soyasaponin in a Chinese wild soybean (Glycine soja Sieb. & Zucc.): implications for breeding significance. Takahashi, Yuya,Li, Xiang-Hua,Wang, Ke-Jing,Tsukamoto, Chigen. 2016

作者其他论文 更多>>