Phylogeography and population structure of the red stingray, Dasyatis akajei inferred by mitochondrial control region

文献类型： 外文期刊

第一作者： Li, Ning

作者： Li, Ning;Chen, Xiao;Song, Na;Gao, Tianxiang;Sun, Dianrong;Lin, Qin

作者机构：

关键词： Control region;Dasyatis akajei;demographic history;genetic diversity;genetic structure

期刊名称：MITOCHONDRIAL DNA （ 影响因子：0.925； 五年影响因子：0.994 ）

ISSN： 1940-1736

年卷期： 2015 年 26 卷 4 期

页码：

收录情况： SCI

摘要： The red stingray Dasyatis akajei is distributed in both marine and freshwater, but little is known about its phylogeography and population structure. We sampled 107 individuals from one freshwater region and 6 coastal localities within the distribution range of D. akajei. Analyses of the first hypervariable region of mitochondrial DNA control region of 474 bp revealed only 17 polymorphism sites that defined 28 haplotypes, with no unique haplotype for the freshwater population. A high level of haplotype diversity and low nucleotide diversity were observed in both marine (h = 0.9393 +/- 0.0104, pi = 0.0069 +/- 0.0040) and freshwater populations (h = 0.8333 +/- 0.2224, pi = 0.0084 +/- 0.0063). Significant level of genetic structure was detected between four marine populations (TZ, WZ, ND and ZZ) via both hierarchical molecular variance analysis (AMOVA) and pairwise FST (with two exceptions), which is unusual for elasmobranchs detected previously over such short geographical distance. However, limited sampling suggested that the freshwater population was not particularly distinct (p>0.05), but additional samples would be needed to confirm it. Demersal and slow-moving characters likely have contributed to the genetically heterogeneous population structure. The demographic history of D. akajei examined by mismatch distribution analyses, neutrality tests and Bayesian skyline analyses suggested a sudden population expansion dating to upper Pleistocene. The information on genetic diversity and genetic structure will have implications for the management of fisheries and conservation efforts.

分类号：

  • 相关文献

[1]Demographic History and Population Structure of Blackfin Flounder (Glyptocephalus stelleri) in Japan Revealed by Mitochondrial Control Region Sequences. Xiao, Yongshuang,Gao, Tianxiang,Zhang, Yan,Yanagimoto, Takashi. 2010

[2]Population genetic structure of the point-head flounder, Cleisthenes herzensteini, in the Northwestern Pacific. Xiao, Yongshuang,Gao, Tianxiang,Zhang, Yan,Yanagimoto, Takashi,Xiao, Yongshuang,Li, Jun,Xiao, Zhizhong,Xu, Shihong,Ma, Daoyuan.

[3]Pronounced population genetic differentiation in the rock bream Oplegnathus fasciatus inferred from mitochondrial DNA sequences. Xiao, Yongshuang,Li, Jun,Ma, Daoyuan,Wang, Yanfeng,Xiao, ZhiZhong,Xu, Shihong,Ren, Guijing.

[4]Genetic structure of Scomber japonicus (Perciformes: Scombridae) along the coast of China revealed by complete mitochondrial cytochrome b sequences. Zhu, Yuxia,Cheng, Qiqun,Rogers, Sean M..

[5]Genetic structure and differentiation of four lake populations of Coilia ectenes (Clupeiformes: Engraulidae) based on mtDNA control region sequences. Cheng, Qiqun,Zhang, Qingyi,Ma, Chunyan,Guan, Weibing.

[6]Reconstructing the origin and dispersal patterns of village chickens across East Africa: Insights from autosomal markers. Mwacharo, J. M.,Hanotte, O.,Nomura, K.,Hanada, H.,Amano, T.,Han, J. L.,Han, J. L..

[7]Genetic diversity and demographical history of Coilia ectenes (Clupeiformes: Engraulidae) inferred from the complete control region sequences of mitochondrial DNA. Ma, Chunyan,Cheng, Qiqun,Zhang, Qingyi.

[8]Genetic diversity and population structure of yellow catfish Pelteobagrus fulvidraco from five lakes in the middle and lower reaches of the Yangtze River, China, based on mitochondrial DNA control region. Zhong, Liqiang,Wang, Minghua,Chen, Youming,Qin, Qin,Pan, Jianlin,Chen, Xiaohui,Song, Chao.

[9]Genetic diversity and population structure of Schizopygopsis younghusbandi Regan in the Yarlung Tsangpo River inferred from mitochondrial DNA sequence analysis. Guo, Shan-Shan,Zhang, Gui-Rong,Guo, Xiang-Zhao,Wei, Kai-Jian,Yang, Rui-Bin,Guo, Shan-Shan,Zhang, Gui-Rong,Guo, Xiang-Zhao,Wei, Kai-Jian,Yang, Rui-Bin,Wei, Qi-Wei.

[10]Population genetic structure and expansion patterns of the cotton pest Adelphocoris fasciaticollis. Lijuan Zhang,Cui, Jinjie,Wanzhi Cai,Junyu Luo,Shuai Zhang,Wendan Li,Chunyi Wang,Limin Lv,Jinjie Cui. 2018

[11]Genetic diversity and differentiation of Chinese wild soybean germplasm (G-soja Sieb. & Zucc.) in geographical scale revealed by SSR markers. Li, X. H.,Wang, K. J.,Jia, J. Z.,Li, X. H.. 2009

[12]Simple sequence repeat-based analysis of the genetic diversity and population genetic structure of populations of Siniperca chuatsi. Sun, C. F.,Ye, X.,Tian, Y. Y.,Dong, J. J.. 2015

[13]High genetic diversity and differentiation in three red tilapia stocks revealed by microsatellite DNA marker analysis. Zhu, W. B.,Yang, H.,Yuan, X. H.,Dong, Z. J.,Fu, J. J.,Wang, L. M.,Su, S. Y.,Liu, N.,Song, F. B.,Chen, X. T.,Zhu, W. B.,Yuan, X. H.,Dong, Z. J.,Fu, J. J.,Wang, L. M.,Su, S. Y.. 2017

[14]Genetic diversity and structure within and between wild and cultivated Saccharina japonica (Laminariales, Phaeophyta) revealed by SSR markers. Liu, Fuli,Yao, Jianting,Wang, Xiuliang,Duan, Delin,Liu, Fuli,Repnikova, Anna,Galanin, Dmitry A.. 2012

[15]Invasion Genetics of Woolly Apple Aphid (Hemiptera: Aphididae) in China. Zhou, Hong-Xu,Zhang, Rui-Ming,Tan, Xiu-Mei,Tao, Yun-Li,Chu, Dong,Wan, Fang-Hao,Wu, Qiang.

[16]Tracing genetic differentiation of Chinese Mongolian sheep using microsatellites. Zhong, T.,Han, J. L.,Zhao, Q. J.,Fu, B. L.,Pu, Y. B.,He, X. H.,Guan, W. J.,Ma, Y. -H.,Zhong, T.,Jeon, J. T.,Han, J. L.,Guo, J..

[17]Assessment of genetic variability in population of Ditylenchus destructor (Thorne 1945) (Tylenchida: Anguinidae) from China. Huang, Wen-Kun,Peng, De-Liang,Zhang, Dong-Sheng,Jiang, Hong-Yun,Peng, Huan,Long, Hai-Bo,Ding, Zhong.

[18]Retrotransposon-based sequence-specific amplification polymorphism markers reveal that cultivated Pyrus ussuriensis originated from an interspecific hybridization. Yu, Peiyuan,Bai, Songling,Teng, Yuanwen,Jiang, Shuang,Wang, Xiaoxiang.

[19]Evidence of genetic recombination in wheat yellow rust populations of a Chinese oversummering area. Mboup, M.,Leconte, M.,Gautier, A.,de Vallavieille-Pope, C.,Enjalbert, J.,Wan, A. M.,Chen, W.,Wan, A. M..

[20]Genetic structure of yellowback sea bream Dentex tumifrons in China inferred from AFLP data. Xia, Junhong,Jiang, Shigui. 2006

作者其他论文 更多>>

微信小程序