The complete mitochondrial genome sequence of Tor sinensis (Cypriniformes, Cyprinidae)
文献类型: 外文期刊
第一作者: Huang, Fujiang
作者: Huang, Fujiang;Liu, Mingdian;Ye, Chao;Liu, Shaoping;Ye, Chao
作者机构:
关键词: Cypriniformes;mitogenome;Tor sinensis
期刊名称:MITOCHONDRIAL DNA ( 影响因子:0.925; 五年影响因子:0.994 )
ISSN: 1940-1736
年卷期: 2015 年 26 卷 5 期
页码:
收录情况: SCI
摘要: The complete mitogenome sequence of Tor sinensis was determined using long PCR reactions. The genome is 16,579 bp in length, including 13 typical vertebrate protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and a control region. Except for eight tRNA and ND6 genes, all other mitochondrial genes are encoded on the heavy strand. The gene order and composition of T. sinensis was similar to that of most other vertebrates. The descending order of the base composition on heavy strand was 31.9% A, 27.4% C, 24.9% T, 15.7% G, with a relatively lower level of G and a slight AT bias of 56.8%. The codon usage followed the typical vertebrate mitochondrial pattern (ATG or GTG for start codon and TAA or TAG for stop codon). There are 9 regions of gene overlap totaling 29 bp and 14 inter-genic spacer regions totaling 71 bp.
分类号:
- 相关文献
作者其他论文 更多>>
-
Advanced droplet microfluidic platform for high-throughput screening of industrial fungi
作者:Yang, Qiaoyi;Ye, Chao;Shi, Tianqiong;Wang, Yuetong;Yang, Qiaoyi;Lu, Siqi;Wu, Haoyu;Zhao, Danshan;Wei, Wei;Yi, Haoran;Li, Xi;Ye, Chao;Shi, Tianqiong;Wang, Yuetong;Ye, Chao;Wang, Zhe;Wang, Zhe
关键词:Droplet microfluidics; High-throughput screening; Industrial fungi; Filamentous fungi
-
Determination of 14 Benzodiazepine Multiresidues in Aquaculture Environment by Ultra-High-Performance Liquid Chromatography-Tandem Mass Spectrometry
作者:Guo, Hongyang;Li, Jinping;Chen, Jianwu;Mei, Yuqing;Gong, Zhiqiang;Liu, Mingdian;Gan, Jinhua;Jiang, Guangjun
关键词:ultra-high-performance liquid chromatography-tandem mass spectrometry; benzodiazepines; aquaculture environment; multiresidues
-
Transcriptome Analysis Reveals the Pivotal Genes and Regulation Pathways Under Cold Stress and Identifies SbERF027, an AP2/ERF Gene That Confers Cold Tolerance in Sorghum
作者:Lou, Qijin;Wang, Peifeng;Xu, Chen;Chen, Shengyu;Yu, Hao;Zhang, Rui;Tian, Guangling;Hao, Di;Ke, Xianshi;Yu, Shuai;Zhou, Jiajia;Zhao, Yao;Ye, Chao;Guo, Jiyuan;Zhang, Haiyan;Chen, Mo;Liu, Xingbei;Yu, Miao;Xie, Zhigan
关键词:AP2/ERF; cold tolerance; RNA-seq; seedlings; sorghum
-
Seasonal and Regional Dynamics of the Intestinal Microbiota in Schizothorax nukiangensis from the Nujiang River
作者:Zhu, Fengyue;Ma, Jie;Xue, Mingyang;Xu, Weitong;Liu, Wenzhi;Zhou, Yong;Liu, Mingdian;Fan, Yuding;Ma, Jie
关键词:
Schizothorax nukiangensis ; Nujiang River; metagenomics; intestinal microbiota; seasonal and regional dynamics -
Impact of the fishing ban on fish diversity and population structure in the middle reaches of the Yangtze River, China
作者:Du, Juan;Tian, Huiwu;Xiang, Zhiyuan;Yu, Lixiong;Duan, Xinbin;Chen, Daqing;Liu, Mingdian;Du, Juan;Zhao, Kangshun;Xu, Jun;Zhao, Kangshun;Xu, Jun
关键词:fish diversity; body length; food web; fishing ban; Yangtze River
-
Effects of sodium butyrate on meat quality improvement and intestinal injury induced by high-level fava beans in Nile tilapia (Oreochromis niloticus)
作者:Qi, Haishen;Cheng, Ke;Dong, Lixue;Tian, Juan;Peng, Di;Wen, Hua;Liu, Mingdian;Jiang, Ming;Qi, Haishen;Yang, Ruibin;Guo, Zhongbao;Luo, Yongju
关键词:Nile tilapia; Fava bean; Sodium butyrate; Meat quality; Intestinal health
-
Passive eDNA Sampling Characterizes Fish Community Assembly in the Lancang River of Yunnan, China
作者:Ding, Li;Fu, Shijian;Ding, Li;Duan, Xinbin;Liu, Mingdian;Chen, Daqing;Wang, Dengqiang;Ma, Baoshan;Zhong, Liqiao;Huang, Xiaofeng
关键词:environmental DNA; the Lancang River; freshwater fish; passive eDNA samplers