QTL Mapping and GWAS Reveal the Genetic Mechanism Controlling Soluble Solids Content in Brassica napus Shoots

文献类型： 外文期刊

第一作者： Wu, Xu

作者： Wu, Xu;Liu, Changle;Zhang, Jiefu;Wu, Xu;Chen, Feng;Zhao, Xiaozhen;Pang, Chengke;Shi, Rui;Liu, Changle;Sun, Chengming;Zhang, Wei;Wang, Xiaodong;Zhao, Xiaozhen;Pang, Chengke;Shi, Rui;Zhang, Jiefu

作者机构：

关键词： Brassica napus; oilseed-vegetable-dual-purpose; shoot; soluble solids content; QTL mapping; GWAS; candidate genes

期刊名称：FOODS （ 影响因子：4.35； 五年影响因子：4.957 ）

ISSN：

年卷期： 2021 年 10 卷 10 期

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收录情况： SCI

摘要： Oilseed-vegetable-dual-purpose (OVDP) rapeseed can effectively alleviate the land contradiction between crops and it supplements vegetable supplies in winter or spring. The soluble solids content (SSC) is an important index that is used to evaluate the quality and sugar content of fruits and vegetables. However, the genetic architecture underlying the SSC in Brassica napus shoots is still unclear. Here, quantitative trait loci (QTLs) for the SSC in B. napus shoots were investigated by performing linkage mapping using a recombinant inbred line population containing 189 lines. A germplasm set comprising 302 accessions was also used to conduct a genome-wide association study (GWAS). The QTL mapping revealed six QTLs located on chromosomes A01, A04, A08, and A09 in two experiments. Among them, two major QTLs, qSSC/21GY.A04-1 and qSSC/21NJ.A08-1, accounted for 12.92% and 10.18% of the phenotypic variance, respectively. In addition, eight single-nucleotide polymorphisms with phenotypic variances between 5.62% and 10.18% were identified by the GWAS method. However, no locus was simultaneously identified by QTL mapping and GWAS. We identified AH174 (7.55 & DEG;Brix and 7.9 & DEG;Brix), L166 (8.9 & DEG;Brix and 8.38 & DEG;Brix), and L380 (8.9 & DEG;Brix and 7.74 & DEG;Brix) accessions can be used as superior parents. These results provide valuable information that increases our understanding of the genetic control of SSC and will facilitate the breeding of high-SSC B. napus shoots.

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