Near telomere-to-telomere genome of the model plant Physcomitrium patens
文献类型: 外文期刊
第一作者: Bi, Guiqi
作者: Bi, Guiqi;Yao, Jiawei;Wang, Huan;Yan, Jianbin;Dai, Junbiao;Zhao, Shijun;Ma, Yingxin;Dai, Junbiao;Zhao, Shijun;Ma, Yingxin;Dai, Junbiao;Zhao, Shijun;Sun, Yuanyuan;Hou, Xueren;Dai, Junbiao;Wang, Huan;Zhao, Mengkai;Sun, Yuanyuan;Hou, Xueren;Jiao, Yuling;Haas, Fabian B.;Varshney, Deepti;Rensing, Stefan A.;Prigge, Michael;Jiao, Yuling;Jiao, Yuling
作者机构:
期刊名称:NATURE PLANTS ( 影响因子:18.0; 五年影响因子:18.6 )
ISSN: 2055-026X
年卷期: 2024 年 10 卷 2 期
页码:
收录情况: SCI
摘要: The model plant Physcomitrium patens has played a pivotal role in enhancing our comprehension of plant evolution and development. However, the current genome harbours numerous regions that remain unfinished and erroneous. To address these issues, we generated an assembly using Oxford Nanopore reads and Hi-C mapping. The assembly incorporates telomeric and centromeric regions, thereby establishing it as a near telomere-to-telomere genome except a region in chromosome 1 that is not fully assembled due to its highly repetitive nature. This near telomere-to-telomere genome resolves the chromosome number at 26 and provides a gap-free genome assembly as well as updated gene models to aid future studies using this model organism.
分类号:
- 相关文献
作者其他论文 更多>>
-
First record of abnormal body coloration in a rockfish Sebastes koreanus (Scorpaenoidei: Sebastidae) from coastal water of China based on morphological characteristics and DNA barcoding
作者:Li, Ang;Wang, Huan;An, Changting;Liu, Shufang;Li, Ang;Liu, Shufang
关键词:abnormal body coloration; Sebastes koreanus; coastal water of China; Yellow Sea; morphological characteristics; DNA barcoding
-
The high-quality genome of Grona styracifolia uncovers the genomic mechanism of high levels of schaftoside, a promising drug candidate for treatment of COVID-19
作者:Zeng, Shaohua;Wang, Zhiqiang;Shi, Dingding;Yu, Fangqin;Liu, Ting;Wang, Ying;Zeng, Shaohua;Yu, Fangqin;Liu, Ting;Peng, Ting;Wang, Ying;Zeng, Shaohua;Wang, Zhiqiang;Shi, Dingding;Wang, Ying;Bi, Guiqi;Yan, Jianbin
关键词:
-
Zno nanoparticles: improving photosynthesis, shoot development, and phyllosphere microbiome composition in tea plants
作者:Chen, Hao;Song, Yujie;Wang, Yu;Wang, Huan;Fan, Kai;Ding, Zhaotang
关键词:Camellia sinensis (L.) O. Kuntze; ZnO NPs; Photosynthetic capacity; Sprouting of new shoots; Epiphytic microorganisms; Endophytic microorganisms; Phyllosphere
-
Multiple genes deletion based on Cre-loxP marker-less gene deletion system for the strains from the genus of Pectobacterium
作者:Che, Shu;Zhuo, Yuanxu;Yang, Liping;Wang, Huan;Fan, Jiaqin;Che, Shu;Yang, Liping;Wang, Huan;Cui, Zhongli
关键词:Antibiotic marker; Cre-loxP multiple genes deletion; Pectobacterium
-
Ultra-Sensitive Detection of the SARS-CoV-2 Nucleocapsid Protein via a Clustered Regularly Interspaced Short Palindromic Repeat/Cas12a-Mediated Immunoassay
作者:Yin, Wen;Li, Leyao;Ma, Lixin;Yang, Yang;Yang, Yuxin;Dai, Junbiao;Mao, Guobin;Ma, Yingxin;Dai, Junbiao;Liang, Ruijing
关键词:ultrasensitive detection; immunoassay; SARS-CoV-2N protein; CRISPR/Cas12a; RCA
-
A designer synthetic chromosome fragment functions in moss
作者:Chen, Lian-Ge;Zhang, Shuo;Zhang, Yuliang;Du, Qingwei;Jiao, Bingke;Qian, Wenfeng;Jiao, Yuling;Lan, Tianlong;Gao, Yi;Li, Bimeng;Wang, Ying;Qian, Wenfeng;Lan, Tianlong;Lan, Tianlong;Jiao, Yuling;Zhang, Shuo;Zhang, Yuliang;Du, Qingwei;Jiao, Bingke;Jiao, Yuling;Zhao, Mengkai;Hu, Zhangli;Dai, Junbiao;Luo, Guangyu;Ma, Yingxin;Zhao, Qiao;Dai, Junbiao;Luo, Guangyu;Ma, Yingxin;Zhao, Qiao;Dai, Junbiao;Du, Qingwei;Lu, Houze;Dai, Junbiao;Jiao, Yuling;Jiao, Yuling
关键词:
-
Integrated transcriptome and metabolome analysis provides insights into blue light response of Flammulina filiformis
作者:Wang, Huan;Zhao, Shuting;Qi, Zexin;Li, Yu;Han, Zhiyang;Han, Lei;Li, Yu
关键词:Flammulina filiformis; Morphogenesis; Blue light; Red light