Polymorphic analysis of microsatellite DNA in wild populations of Chinese shrimp (Fenneropenaeus chinensis)

文献类型: 外文期刊

第一作者: Liu, P

作者: Liu, P;Meng, XH;Kong, J;He, YY;Wang, QY

作者机构:

关键词: Fenneropenaeus chinensis;geographic population;microsatellite DNA;polymorphic analysis

期刊名称:AQUACULTURE RESEARCH ( 影响因子:2.082; 五年影响因子:2.415 )

ISSN: 1355-557X

年卷期: 2006 年 37 卷 6 期

页码:

收录情况: SCI

摘要: Primers were designed for eight microsatellite loci from Chinese shrimp Fenneropenaeus chinensis. Microsatellites were used to characterize three wild populations from the China coast of the Yellow and Bohai Seas (HB), and the west coast (KX) and south coast of the Korean Peninsula (KN). A total of sixty-one alleles were obtained, and the average observed heterozygosity ranged from 0.660 to 0.756. Six of the 24 population-locus cases showed a significant departure from the Hardy-Weinberg equilibrium, three of them from population KN, two from KX and one from HB. The F-st values indicated that genetic variation was greater within populations than between populations. Analysis using unweighted pair group method with arithmetic mean showed that the relationship between populations HB and KX was closer than between KN and the other two populations. Polymorphic information contents of the eight microsatellites ranged from 0.598 to 0.918. These results indicated that all eight microsatellite loci would be useful for the analysis of genetic variation in Chinese shrimp (F. chinensis) populations.

分类号:

  • 相关文献

[1]Heterosis of haernolymph analytes of two geographic populations in Chinese shrimp Fenneropenaeus chinensis. Yang, Cuihua,Kong, Jie,Wang, Qingyin,Liu, Qinghui,Tian, Yi,Luo, Kun. 2007

[2]Large-scale development of EST-SSR markers in sponge gourd via transcriptome sequencing. Wu, Hai-Bin,Gong, Hao,Liu, Peng,He, Xiao-Li,Luo, Shao-Bo,Zheng, Xiao-Ming,Zhang, Chang-Yuan,He, Xiao-Ming,Luo, Jianning.

[3]Development of microsatellite markers for Mytilus coruscus (Mytilidae), an economically important mussel in the East China Sea. Guo, B. -Y.,Wu, C. -W.,Zhu, A. -Y.,Ye, Y. -Y.,Liu, C. -L.. 2013

[4]Microsatellite-Based Genetic Differentiation and Phylogeny of Sheep Breeds in Mongolia Sheep Group of China. Sun Wei,Chang Hong,Liao Xin-jun,Hassan, Musa Hussein,Chu Ming-xing,James, Kija. 2011

[5]CONSTRUCTION AND CHARACTERIZATION OF A TENTATIVE AMPLIFIED FRAGMENT LENGTH POLYMORPHISM-SIMPLE SEQUENCE REPEAT LINKAGE MAP OF LAMINARIA (LAMINARIALES, PHAEOPHYTA). Yang, Guanpin,Sun, Ying,Shi, Yuanyuan,Zhang, Linan,Guo, Shanshan,Li, Bingjun,Li, Xiaojie,Li, Zhiling,Cong, Yizhou,Zhao, Yushan,Wang, Wenquan.

[6]Genetic diversity of different populations and improved growth in the F1 hybrids in the swimming crab (Portunus trituberculatus). Gao, B. Q.,Liu, P.,Li, J.,Wang, Q. Y.,Li, X. P.,Gao, B. Q.. 2014

[7]Beet Webworm (Lepidoptera: Pyralidae) Migration in China: Evidence from Genetic Markers. Jiang, Xing-Fu,Cao, Wei-Ju,Zhang, Lei,Luo, Li-Zhi.

[8]Amplified fragment length polymorphism analysis of Mythimna separata (Lepidoptera : Noctuidae) geographic and melanie laboratory populations in China. Luo, Li-Zhi,Zhang, Lei.

[9]Genetic variation and evolutionary demography of Fenneropenaeus chinensis populations, as revealed by the analysis of mitochondrial control region sequences. Kong, Xiao Yu,Li, Yu Long,Li, Yu Long,Shi, Wei,Kong, Jie. 2010

[10]Construction of a genetic linkage map in Fenneropenaeus chinensis using SNP markers. Zhang, Jian-Yong,Wang, Wei-Ji,Kong, Jie,Wang, Qing-Yin. 2013

[11]Estimation of genetic parameters and breeding values in shrimp Fenneropenaeus chinensis using the REML/BLUP procedure. Zhang Tianshi,Kong Jie,Luan Sheng,Wang Qingyin,Luo Kun,Zhang Tianshi,Tian Yi. 2011

[12]Toxic dinoflagellate Alexandrium tamarense induces oxidative stress and apoptosis in hepatopancreas of shrimp (Fenneropenaeus chinensis). Liang Zhongxiu,Ren Hai,Liang Zhongxiu,Li Jian,Li Jitao,Tan Zhijun,Zhao Fazhen. 2014

[13]Lack of gender effect on the pharmacokinetics of oxytetracycline in Fenneropenaeus chinensis after intramuscular administration. Sun Ming,Sun Ming,Li Jian,Chang Zhiqiang,Zhao Fazhen,Li Jitao,Guo Wenting. 2015

[14]Nitrogen and phosphorus budget of a polyculture system of sea cucumber (Apostichopus japonicus), jellyfish (Rhopilema esculenta) and shrimp (Fenneropenaeus chinensis). Li Junwei,Dong Shuanglin,Gao Qinfeng,Li Junwei,Zhu Changbo. 2014

[15]Genetic parameters for cold tolerance and body weight of Chinese fleshy prawn, Fenneropenaeus chinensis. Li Wenjia,Luan Sheng,Luo Kun,Sui Juan,Lu Xia,Wang Qingyin,Kong Jie,Li Wenjia,Luan Sheng,Luo Kun,Sui Juan,Lu Xia,Wang Qingyin,Kong Jie. 2016

[16]Identification, cloning and characterization of an extracellular signal-regulated kinase (ERK) from Chinese shrimp, Fenneropenaeus chinensis. Li, Xupeng,Kong, Jie,Li, Xupeng,Meng, Xianhong,Kong, Jie,Luo, Kun,Luan, Sheng,Cao, Baoxiang,Liu, Ning,Pang, Jinfei,Shi, Xiaoli. 2013

[17]Expression profiles of the p38 MAPK signaling pathway from Chinese shrimp I Fenneropenaeus chinensis in response to viral and bacterial infections. He, Yuying,Liu, Ping,Li, Jian,Wang, Qingyin,He, Yuying,Li, Jian,Yao, Wanlong. 2018

[18]Pedigree tracing of Fenneropenaeus chinensis by microsatellite DNA markers genotyping. Dong Shirui,Kong Jie,Zhang Qingwen,Liu Ping,Meng Xianhong,Wang Rucai. 2006

[19]Genetic evaluation of feed efficiency in the breeding population of Fenneropenaeus chinensis "Huanghai No. 2" using phenotypic, pedigree and genomic information. Dai, Ping,Luan, Sheng,Lu, Xia,Luo, Kun,Cao, Baoxiang,Meng, Xianhong,Kong, Jie,Dai, Ping,Luan, Sheng,Lu, Xia,Luo, Kun,Cao, Baoxiang,Meng, Xianhong,Kong, Jie. 2017

[20]Parentage determination of Chinese shrimp (Fenneropenaeus chinensis) based on microsatellite DNA markers. Dong, Shirui,Kong, Jie,Zhang, Tianshi,Meng, Xianhong,Wang, Rucai. 2006

作者其他论文 更多>>