Genetic analysis of four wild chum salmon Oncorhynchus keta populations in China based on microsatellite markers

文献类型： 外文期刊

第一作者： Chen, JP

作者： Chen, JP;Sun, DJ;Dong, CZ;Liang, B;Wu, WH;Zhang, SY

作者机构：

关键词： genetic variation;genetic bottleneck;captive breeding

期刊名称：ENVIRONMENTAL BIOLOGY OF FISHES （ 影响因子：1.844； 五年影响因子：1.839 ）

ISSN： 0378-1909

年卷期： 2005 年 73 卷 2 期

页码：

收录情况： SCI

摘要： To assess the genetic variation and population structure of wild chum salmon in China, we analyzed microsatellite loci for populations in the Amur, Wusuli, Suifen Current and the Tumen rivers. We evaluated expected heterozygosity with two estimators of genetic differentiation (F-ST and G(ST)) and Nei's standard genetic distance. The average expected heterozygosity across the 10 loci was 0.65 in the Wusuli River and the Suifen Current River, 0.64 in the Amur River and 0.66 in the Tumen River, The results of this study show that the recent declines in chum salmon have not led to low levels of genetic variability in China. The proportion of inter-population subdivision among chum salmon was between 5.7 and 6.8%. According to the estimator used, the NJ tree based on Nei's standard genetic distance indicated that there were two different branches (the Sea of Okhotsk branch and the Sea of Japan branch), the Amur River and the Wusuli River populations were closer, while the Suifen Current River and the Tumen River clustered together. The genetic test for population bottlenecks provided no evidence for a significant genetic signature of population decline, which is consistent with the record of the four populations we have in the last few years.

分类号：

  • 相关文献

[1]Microsatellite DNA Typing for Assessment of Genetic Variability in Taihu Goose: A Major Breed of China. Tang Qing-Ping,Zhang Shuang-Jie,Guo Jun,Chen Kuan-Wei,Lu Huo-Lin,Su Jian-Dong. 2009

[2]Microsatellite markers reveal genetic diversity of wild soybean in different habitats and implications for conservation strategies (Glycine soja) in China. Wang, Ke-Jing,Li, Xiang-Hu,Yan, Mao-Fen. 2014

[3]Microsatellite DNA Typing for Assessment of Genetic Variability in Guangxi Three-yellow Chickens. Zou Jian-Min,Shu Jing-Ting,Song Wei-Tao,Han Wei,Li Hui-Fang,Wei Feng-Ying.

[4]Analysis of Genetic Diversity in Qingyuan Partridge Chickens Based on Microsatellite Markers. Hui-Fang, Li,Jing-Ting, Shu,Wei-Tao, Song,Kuan-Wei, Chen.

[5]Evaluation of yield and agronomic traits and their genetic variation in 488 global collections of Brassica napus L.. Chen, Biyun,Xu, Kun,Li, Jun,Li, Feng,Qiao, Jiangwei,Li, Hao,Gao, Guizhen,Yan, Guixin,Wu, Xiaoming.

[6]Genetic variation in V gene of class II Newcastle disease virus. Hao, Huafang,Liu, Peng,Ren, Shanhui,Gao, Xiaolong,Wang, Yanping,Wang, Xinglong,Zhang, Shixia,Yang, Zengqi,Chen, Shengli.

[7]Discovery, evaluation and distribution of haplotypes of the wheat Ppd-D1 gene. Guo, Zhiai,Song, Yanxia,Zhou, Ronghua,Jia, Jizeng,Guo, Zhiai,Ren, Zhenglong.

[8]Phylogenetic analysis of the haemagglutinin gene of canine distemper virus strains detected from breeding foxes, raccoon dogs and minks in China. Zhao, Jian-Jun,Yan, Xi-Jun,Chai, Xiu-Li,Luo, Guo-Liang,Zhang, Hai-Ling,Gao, Han,Bai, Xue,Zhang, Lei,Chen, Tao,Xu, Lei,Zhao, Chun-Fei,Wang, Feng-Xue,Shao, Xi-Qun,Wu, Wei,Cheng, Shi-Peng,Martella, Vito,Liu, Ying-Xue.

[9]Variation in Adzuki Bean (Vigna angularis) Germplasm Grown in China. Redden, Robert J.,Basford, Kaye E.,Kroonenberg, Pieter M.,Islam, F. M. Amirul,Wang, Shumin,Cao, Yongsheng,Zong, Xuxiao,Wang, Xiaoming.

[10]Genetic diversity in soybean genotypes from north-eastern China and identification of candidate markers associated with maturity rating. Li, W.,Han, Y.,Zhang, D.,Yang, M.,Teng, W.,Jiang, Z.,Qiu, L.,Qiu, L..

[11]Genetic variation and phylogeography of Psammosilene tunicoides (Caryophyllaceae), a narrowly distributed and endemic species in south-western China. Zhang, Qing-Ying,Zhao, Yu-Juan,Gong, Xun,Zhang, Qing-Ying.

[12]Exploitation of Malus EST-SSRs and the utility in evaluation of genetic diversity in Malus and Pyrus. Yao, Lihua,Zheng, Xiaoyan,Cai, Danying,Teng, Yuanwen,Yao, Lihua,Zheng, Xiaoyan,Cai, Danying,Teng, Yuanwen,Gao, Yuan,Wang, Kun,Cao, Yufen.

[13]Genetic Variation of Mitochondrial DNA in Chinese Populations of Pectinophora gossypiella (Lepidoptera: Gelechiidae). Hou, Maolin,Wu, Kongming.

[14]Screening and identification of B cell epitopes of structural proteins of foot-and-mouth disease virus serotype Asia1. Zhang, Zhong-Wang,Zhang, Yong-Guang,Wang, Yong-Lu,Pan, Li,Fang, Yu-Zhen,Jiang, Shou-Tian,Lue, Jian-Liang,Zhou, Peng.

[15]Frequency of Bt Resistance Alleles in H-armigera During 2006-2008 in Northern China. Wu, Kongming,Gould, Fred.

[16]Identification of quantitative trait loci for drought tolerance at seedling stage by screening a large number of introgression lines in maize. Hao, Z.,Liu, X.,Li, X.,Xie, C.,Li, M.,Zhang, D.,Zhang, S.,Hao, Z.,Xu, Y..

[17]AFLP analyses of genetic variation of Eupatorium adenophorum (Asteraceae) populations in China. Huang, W. K.,Wan, F. H.,Guo, J. Y.,Peng, D. L.,Huang, W. K.,Gao, B. D.,Xie, B. Y..

[18]Genetic variation analysis across six life periods in a natural population of the Chinese shrimp "Fenneropenaeus chinensis" in Bohai bay using SSR markers. Zhang, Kai,Wang, Weiji,Jin, Xianshi,Zhang, Kai,Xiao, Guangxia,Song, Wenping,Gao, Yan.

[19]Microsatellite diversity in cultured populations of rainbow trout Oncorhynchus mykiss in China. Zhao, Y.,Sun, X.,Zhu, X.,Zhao, Y..

[20]Analysis of synonymous codon usage in porcine reproductive and respiratory syndrome virus. Liu, Yong-sheng,Zhou, Jian-hua,Chen, Hao-tai,Ma, Li-na,Ding, Yao-zhong,Wang, Meng,Zhang, Jie.

作者其他论文 更多>>

微信小程序