Identification of Development and Pathogenicity Related Gene in Botrytis cinerea via Digital Gene Expression Profile

文献类型： 外文期刊

第一作者： Zhao, Bin

作者： Zhao, Bin;Si, He Long;Sun, Zhi Ying;Xu, Zheng;Zhang, Jin Lin;Xing, Ji Hong;Dong, Jin Gao;Chen, Zhan

作者机构：

关键词： Botrytis cinerea;Pathogenicity;Development and Growth;Digital Gene Expression Profile

期刊名称：JUNDISHAPUR JOURNAL OF MICROBIOLOGY （ 影响因子：0.747； 五年影响因子：1.499 ）

ISSN： 2008-3645

年卷期： 2015 年 8 卷 4 期

页码：

收录情况： SCI

摘要： Background: Botrytis cinerea, a haploid Euascomycete fungus that infects numerous crops, has been used as a model system for studying molecular phytopathology. Botrytis cinerea adopts various modes of infection, which are mediated by a number of pathogenicity and virulence-related genes. Many of these genes have not been reported previously. Objectives: This study aimed to investigate development and pathogenicity-related genes between a novel nonpathogenic mutant and the Wild Type (WT) in B. cinerea. Materials and Methods: Digital Gene Expression (DGE) tag profiling can reveal novel genes that may be involved in development and pathogenicity of plant pathogen. A large volume of B. cinerea tag-seq was generated to identify differential expressed genes by the Illumina DGE tag profiling technology. Results: A total of 4,182,944 and 4,182,021 clean tags were obtained from the WT and a nonpathogenic mutant stain (BCt89), respectively, and 10,410 differentially expressed genes were identified. In addition, 84 genes were expressed in the WT only while 34 genes were expressed in the mutant only. A total of 664 differentially expressed genes were involved in 91 Kyoto Encyclopedia of Genes and Genome pathways, including signaling and metabolic pathways. Conclusions: Expression levels of 1,426 genes were significantly up-regulated in the mutant compared to WT. Furthermore, 301 genes were down-regulated with False Discovery Rates (FDR) of < 0.001 and absolute value of log2 Ratio of >= 1.

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