Genetic diversity and marker-trait association analysis for agronomic traits in Aconitum carmichaelii Debeaux

文献类型： 外文期刊

第一作者： Yu, Ma

作者： Yu, Ma;Cao, Ling-Li;Shu, Xiao-Yan;Huang, Jing;Liu, Dan;Zhang, Hong;Hou, Da-Bin;Yang, Yu-Xia;Guan, Ling-Liang;Gou, Lu-Lu

作者机构：

关键词： Aconitum carmichaelii Debeaux;agronomic trait;genetic diversity;marker-trait association

期刊名称：BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT （ 影响因子：1.632； 五年影响因子：2.029 ）

ISSN： 1310-2818

年卷期： 2017 年 31 卷 5 期

页码：

收录情况： SCI

摘要： The root of Aconitum carmichaelii Debeaux is used in Oriental folk medicine, but its cultivation is very labour intensive. Therefore, it is important to dissect the genetic mechanism of agronomic traits to breed elite cultivars for commercial cultivation. We analyzed the genetic diversity of 126 genotypes of A. carmichaelii collected from the major productive regions in China based on 280 amplified fragment length polymorphism (AFLP) loci. The values of the coefficient of gene differentiation, Nei's gene diversity index, and Shannon's information index, and the results from a hierarchical analysis of molecular variance analysis indicated that there is more genetic variability within populations than between populations. Marker-trait association analyses were conducted under a general linear model without controlling for population structure, and under a relative kinship model. In total, 59 loci were identified under both models for plant height (PH), stem diameter (SD), lateral root number (LRN), fresh weight and dry weight of stem (FWS and DWS, respectively), fresh weight and dry weight of leaves per plant (FWL and DWL, respectively), and fresh weight (FWR) and dry weight of individual lateral roots (DWR). Thirty-eight loci were associated with two to eight traits. For example, P1M1-39 was associated with variations in DWR, DWS, FWS, SD, DWL, FWL, FWR and PH, and P1M1-14 was close to a locus associated with variations in DWR, DWS, FWS, DWL, FWL, PH, FWR and LRN. Loci associated with favourable traits should be combined in commercial varieties to improve the yield and quality of A. carmichaelii.

分类号：

  • 相关文献

[1]Identification of SNP markers associated with tolerance to ammonia toxicity by selective genotyping from de novo assembled transcriptome in Litopenaeus vannamei. Lu, Xia,Kong, Jie,Meng, Xianhong,Cao, Baoxiang,Luo, Kun,Dai, Ping,Luan, Sheng,Lu, Xia,Kong, Jie,Meng, Xianhong,Cao, Baoxiang,Luo, Kun,Dai, Ping,Luan, Sheng. 2018

[2]Mining and identification of SNP markers associated with growth traits in the clam Meretrix meretrix. Dai, Ping,Dai, Ping,Wang, Hongxia,Liu, Baozhong,Liu, Baozhong.

[3]Pasting properties, grain-filling characteristics and allelic variation linked to the grain quality in diverse rice. Chen, Likai,Yan, Xianchen,Wang, Liping,Gao, Weiwei,Yang, Jing,Chen, Siping,Wang, Hui,Chen, Zhiqiang,Guo, Tao,Zhou, Jiyong,Guo, Zhenhua.

[4]Analysis of QTL for seed oil content in Brassica napus by association mapping and QTL mapping. Fu, Ying,Zhang, Dongqing,Zhang, Yaofeng,Lin, Baogang,Hua, Shuijin,Ding, Houdong,Yu, Huasheng,Li, Jiana,Qian, Wei,Gleeson, Madeleine,Frauen, Martin.

[5]Gene Discovery in Triticum dicoccoides, the Direct Progenitor of Cultivated Wheats. Sun, D. F.,Peng, Y. L.,Nevo, E.,Peng, J. H.. 2013

[6]Detection of QTLs for phosphorus use efficiency in relation to agronomic performance of wheat grown under phosphorus sufficient and limited conditions. Su, Jun-Ying,Zheng, Qi,Li, Hong-Wei,Li, Bin,Tong, Yi-Ping,Li, Zhen-Sheng,Jing, Rui-Lian. 2009

[7]Identification of Quantitative Trait Loci for Bacterial Blight Resistance Derived from Oryza meyeriana and Agronomic Traits in Recombinant Inbred Lines of Oryza sativa. Chen, Li-Na,Yang, Yong,Yan, Cheng-Qi,Wang, Ming,Yu, Chu-Lang,Zhou, Jie,Cheng, Ye,Cheng, Xiao-Yue,Chen, Jian-Ping,Chen, Li-Na,Zhang, Wei-Lin,Cheng, Xiao-Yue. 2012

[8]Development of Isogenic Lines of Morphological Markers in Indica Rice. Zeng, DL,Qian, Q,Dong, GJ,Zhu, XD,Dong, FG,Teng, S,Luo, LB,Cao, LY,Cheng, SH,Xiong, ZM.

[9]Discovery and transmission of functional QTL in the pedigree of an elite soybean cultivar Suinong14. Yang, R. Q.,Qin, J.,Li, Y. H.,Guan, R. X.,Chang, R. Z.,Qiu, L. J.,Qin, J.,Jiang, C. X.,Li, W. B..

[10]Fine Mapping of qHD8-1, a QTL Controlling the Heading Date, to a 26-kb DNA Fragment in Rice (Oryza sativa L.). Liu, Xu,Wang, Wenying,Ding, Hanfeng,Yao, Fangyin,Pei, Chengguo,Zhu, Changxiang,Wen, Fujiang,Jiang, Mingsong,Li, Guangxian.

[11]The miR156/SPL Module, a Regulatory Hub and Versatile Toolbox, Gears up Crops for Enhanced Agronomic Traits. Wang, Hai,Wang, Haiyang. 2015

[12]The genetic and molecular basis of crop height based on a rice model. Liu, Fang,Wang, Pandi,Li, Xiaofei,Yan, Xiaohong,Wu, Gang,Zhang, Xiaobo,Fu, Donghui. 2018

[13]Improvement of bacterial blight resistance of hybrid rice in China using the Xa23 gene derived from wild rice (Oryza rufipogon). Zhou, Yong-Li,Uzokwe, Veronica N. E.,Cheng, Li-Rui,Wang, Lei,Chen, Kai,Gao, Xiao-Qing,Sun, Yong,Zhu, Ling-Hua,Zhang, Qi,Xu, Jian-Long,Li, Zhi-Kang,Zhang, Cong-He,Chen, Jin-Jie,Ali, Jauhar,Li, Zhi-Kang.

[14]Haplotype analysis of the genes encoding glutamine synthetase plastic isoforms and their association with nitrogen-use- and yield-related traits in bread wheat. Li, Xin-Peng,Zhao, Xue-Qiang,He, Xue,Li, Bin,Liu, Dong-Cheng,Zhang, Ai-Min,Tong, Yi-Ping,Li, Zhen-Sheng,Zhao, Guang-Yao,Zhang, Xue-Yong. 2011

[15]Application of marker-assisted backcross to introgress Bph3, Bph14 and Bph15 into an elite indica rice variety for improving its resistance to brown planthopper. Hu, Wei,Jiang, Yijun,Xiao, Hanxiang,Zhang, Yang,Hu, Kan.

[16]Genetic gains in grain yield, net photosynthesis and stomatal conductance achieved in Henan Province of China between 1981 and 2008. Xia, X. C.,He, Z. H.,Zheng, T. C.,Yin, G. H.,Wang, L. N.,Han, Y. L.,Huang, F.,Tang, J. W.,Zhang, X. K.,Chen, L.,He, Z. H..

[17]Identification and molecular mapping of a dwarfing gene in barley (Hordeum vulgare L.) and its correlation with other agronomic traits. Wang, Junmei,McNeil, David L.,Zhou, Meixue,Wang, Junmei,Yang, Jianming.

[18]Taxonomic status and genetic diversity of cultured largemouth bass Micropterus salmoides in China. Bai, Junjie,Quan, Yingchun,Liang, Suxian,Lutz-Carrillo, Dijar J.,Liang, Suxian.

[19]Association mapping of yield-related traits and SSR markers in wild soybean (Glycine sofa Sieb. and Zucc.). Hu, Zhenbin,Zhang, Dan,Zhang, Guozheng,Kan, Guizhen,Hong, Delin,Yu, Deyue,Hu, Zhenbin,Zhang, Dan. 2014

[20]Complete genomic sequence analyses of Turnip mosaic virus basal-BR isolates from China. Wang, Hong-Yan,Liu, Jin-Liang,Gao, Rui,Chen, Jia,Shao, Yun-Hua,Li, Xiang-Dong,Wang, Hong-Yan,Liu, Jin-Liang,Gao, Rui. 2009

作者其他论文 更多>>

微信小程序