Multi-omics dataset of individual variations in growth performance of large yellow croaker
文献类型: 外文期刊
作者: Huang, Hao 1 ; Cheng, Zhenheng 1 ; Wang, Yabing 2 ; Qiao, Guangde 2 ; Wang, Xiaoshan 2 ; Yue, Yanfeng 2 ; Gao, Quanxin 1 ; Peng, Shiming 2 ;
作者机构: 1.Huzhou Univ, Coll Life Sci, Huzhou 313000, Peoples R China
2.Chinese Acad Fishery Sci, East China Sea Fisheries Res Inst, Key Lab Marine & Estuarine Fisheries, Minist Agr, Shanghai 200090, Peoples R China
期刊名称:SCIENTIFIC DATA ( 影响因子:6.9; 五年影响因子:8.7 )
ISSN:
年卷期: 2025 年 12 卷 1 期
页码:
收录情况: SCI
摘要: Large yellow croaker (Larimichthys crocea) is a highly economically important marine fish species in China. However, substantial individual variations in growth performance have emerged as a limiting factor for the sustainable development of the large yellow croaker industry. Gut microbiota plays a crucial role in fish growth and development by regulating metabolic processes. To explore these dynamics, we employed metagenomics, transcriptomics, and untargeted metabolomics to comprehensively analyze the structure of the intestinal microbiome and its relationship with intestinal metabolism and host gene expression. We constructed association models for "gut microbiota-differentially expressed genes", "differentially expressed genes-metabolites," and "gut microbiota-metabolites." Sequencing data and LC-MS/MS raw data have been deposited in NCBI and MetaboLights databases for public access. Our findings offer critical insights into the molecular mechanisms underlying growth variations in L. crocea and provide valuable data for the selective breeding of improved strains.
- 相关文献
作者其他论文 更多>>
-
Comparative analysis of genomic prediction models based on body weight trait in large yellow croaker (Larimichthys crocea)
作者:Fang, Jialu;Xu, Qinglei;Feng, Li;Hai, Jiawei;Zhou, Linyan;Xu, Jian;Fang, Jialu;Hai, Jiawei;Wang, Yabing;Peng, Shiming
关键词:Large yellow croaker; Body weight trait; Genomic selection; GBLUP; Machine learning
-
Seedling Selection of the Large Yellow Croaker (Larimichthys crocea) for Sustainable Aquaculture: A Review
作者:Han, Xinran;Zhang, Shengmao;Wang, Yabing;Fang, Hui;Peng, Shiming;Yang, Shenglong;Wu, Zuli;Han, Xinran
关键词:
Larimichthys crocea ; seedling selection; genomics; artificial intelligence; marker-assisted selection; sustainable aquaculture -
Annual environmental changes in large yellow croaker aquaculture in Dachen Island, China
作者:Qiao, Guangde;Wang, Yabing;Liu, Yongli;Min, Minghua;Wang, Lei;Wang, Yongjin;Wang, Lumin;Peng, Shiming;Chen, Heng
关键词:Deep-sea mariculture; Large yellow croaker; Large-scale enclosure aquaculture; Water quality evaluation; Sediment quality evaluation
-
Transcriptome analysis of the gonad reveals growth differences between large, medium and small individuals in a pure family of Macrobrachium rosenbergii
作者:Liu, Peimin;Zhao, Xiuxin;Tang, Qiongying;Li, Jingfen;Dong, Haiyan;Yang, Guoliang;Yi, Shaokui;Gao, Quanxin;Xia, Zhenglong;Yang, Guoliang;Yi, Shaokui;Gao, Quanxin
关键词:Macrobrachium Rosenbergii; Gonad; RNA -sequencing; Growth; Differentially expressed genes
-
Isolation, identification, and evaluation of intestinal bacteria in Macrobrachium rosenbergii
作者:Zhao, Xiuxin;Luo, Jinping;Liu, Peimin;Huang, Hao;Cheng, Zhenheng;Peng, Xin;Tang, Qiongying;Yang, Guoliang;Yi, Shaokui;Gao, Quanxin;Zhao, Xiuxin;Luo, Jinping;Liu, Peimin;Huang, Hao;Cheng, Zhenheng;Peng, Xin;Tang, Qiongying;Yang, Guoliang;Yi, Shaokui;Gao, Quanxin;Zhao, Xiuxin;Luo, Jinping;Liu, Peimin;Huang, Hao;Cheng, Zhenheng;Peng, Xin;Tang, Qiongying;Yang, Guoliang;Yi, Shaokui;Gao, Quanxin;Yang, Guoliang;Yi, Shaokui;Gao, Quanxin
关键词:Macrobrachium rosenbergii; intestinal bacteria; probiotic; Lactococcus garvieae
-
Comprehensive Transcriptome Sequencing and Analysis of Euspira gilva: Insights into Aquaculture and Conservation
作者:Su, Zhixing;Xu, Jiayuan;Lv, Xiaokang;Song, Xuefeng;Wang, Xiaoshan;Zhang, Bianbian;Tang, Baojun;Yang, Liguo;Sui, Yanming;Wang, Benjian;Yang, Liguo
关键词:
Euspira gilva ; full-length transcriptome; SSR; transcription factor; functional annotation -
Unveiling the Molecular Mechanisms Regulating Muscle Elasticity in the Large Yellow Croaker: Insights from Transcriptomics and Metabolomics
作者:Liu, Mengyang;Qiao, Guangde;Wang, Yabing;Liu, Shengyu;Wang, Xiaoshan;Yue, Yanfeng;Peng, Shiming
关键词:
Larimichthys crocea ; muscle quality; association analysis; amino acid metabolism



