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A chromosome-level genome for the flower thrips Frankliniella intonsa

文献类型： 外文期刊

作者： Song, Wei 1 ; Wang, Jia-Xu 1 ; Cao, Li-Jun 1 ; Chen, Jin-Cui 1 ; Bao, Wen-Xue 3 ; Chen, Min 2 ; Wei, Shu-Jun 1 ;

作者机构： 1.Beijing Acad Agr & Forestry Sci, Inst Plant Protect, Beijing 100097, Peoples R China

2.Beijing Forestry Univ, Beijing Key Lab Forest Pests Control, Beijing 100083, Peoples R China

3.Inner Mongolia Agr Univ, Coll Forestry, Hohhot 010019, Peoples R China

期刊名称：SCIENTIFIC DATA （ 影响因子：9.8； 五年影响因子：10.8 ）

ISSN：

年卷期： 2024 年 11 卷 1 期

页码：

收录情况： SCI

摘要： The flower thrips Frankliniella intonsa (Thysanoptera: Thripidae) is a common insect found in flowers of many plants. Sometimes, F. intonsa causes damage to crops through direct feeding and transmission of plant viruses. Here, we assembled a chromosomal level genome of F. intonsa using the Illumina, Oxford Nanopore (ONT), and Hi-C technologies. The assembled genome had a size of 209.09 Mb, with a contig N50 of 997 bp, scaffold N50 of 13.415 Mb, and BUSCO completeness of 92.5%. The assembled contigs were anchored on 15 chromosomes. A set of 14,109 protein-coding genes were annotated in the genome with a BUSCO completeness of 95.0%. The genome contained 491 non-coding RNA and 0.57% of interspersed repeats. This high-quality genome provides a valuable resource for understanding the ecology, genetics, and evolution of F. intonsa, as well as for controlling thrips pests.

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