Development and evaluation of the utility of GenoBaits Peanut 40K for a peanut MAGIC population
文献类型： 外文期刊
作者： Sun, Ziqi 1 ; Zheng, Zheng 1 ; Qi, Feiyan 1 ; Wang, Juan 1 ; Wang, Mengmeng 1 ; Zhao, Ruifang 1 ; Liu, Hua 1 ; Xu, Jing 1 ; Qin, Li 1 ; Dong, Wenzhao 1 ; Huang, Bingyan 1 ; Han, Suoyi 1 ; Zhang, Xinyou 1 ;
作者机构： 1.Henan Acad Agr Sci, Henan Prov Key Lab Oil Crops Improvement, Key Lab Oil Crops Huang Huai Hai Plains, State Ind Innovat Ctr Biol Breeding,Shennong Lab,M, Zhengzhou, Henan, Peoples R China
关键词： GenoBaits Peanut 40K; GBTS liquid chip; MAGIC population; Pod size; Peanut
期刊名称：MOLECULAR BREEDING （ 影响因子：3.1； 五年影响因子：3.1 ）
ISSN： 1380-3743
年卷期： 2023 年 43 卷 10 期
页码：
收录情况： SCI
摘要： Population and genotype data are essential for genetic mapping. The multi-parent advanced generation intercross (MAGIC) population is a permanent mapping population used for precisely mapping quantitative trait loci. Moreover, genotyping-by-target sequencing (GBTS) is a robust high-throughput genotyping technology characterized by its low cost, flexibility, and limited requirements for information management and support. In this study, an 8-way MAGIC population was constructed using eight elite founder lines. In addition, GenoBaits Peanut 40K was developed and utilized for the constructed MAGIC population. A subset (297 lines) of the MAGIC population at the S2 stage was genotyped using GenoBaits Peanut 40K. Furthermore, these lines and the eight parents were analyzed in terms of pod length, width, area, and perimeter. A total of 27 single nucleotide polymorphisms (SNPs) were revealed to be significantly associated with peanut pod size-related traits according to a genome-wide association study. The GenoBaits Peanut 40K provided herein and the constructed MAGIC population will be applicable for future research to identify the key genes responsible for important peanut traits.
- 相关文献
作者其他论文 更多>>
-
AhFAD3-A01 enhances α-linolenic acid content in Arabidopsis and peanut
作者：Li, Xiaona;Xue, Lulu;Han, Liu;Qu, Pengyu;Zhao, Huanhuan;Luo, Dandan;Wang, Xiaobo;Huang, Bingyan;Zhang, Maoning;Li, Chenyu;Zhang, Zhongxin;Dong, Wenzhao;Lei, Shi;Zhang, Xinyou;Li, Xiaona;Xue, Lulu;Han, Liu;Qu, Pengyu;Zhao, Huanhuan;Luo, Dandan;Wang, Xiaobo;Huang, Bingyan;Zhang, Maoning;Li, Chenyu;Zhang, Zhongxin;Dong, Wenzhao;Lei, Shi;Zhang, Xinyou;Li, Xiaona;Xue, Lulu;Han, Liu;Qu, Pengyu;Zhao, Huanhuan;Luo, Dandan;Wang, Xiaobo;Huang, Bingyan;Zhang, Maoning;Li, Chenyu;Zhang, Zhongxin;Dong, Wenzhao;Lei, Shi;Zhang, Xinyou;Li, Xiaona;Xue, Lulu;Han, Liu;Qu, Pengyu;Zhao, Huanhuan;Luo, Dandan;Wang, Xiaobo;Huang, Bingyan;Zhang, Maoning;Li, Chenyu;Zhang, Zhongxin;Dong, Wenzhao;Lei, Shi;Zhang, Xinyou;Li, Xiaona;Xue, Lulu;Han, Liu;Qu, Pengyu;Zhao, Huanhuan;Luo, Dandan;Wang, Xiaobo;Huang, Bingyan;Zhang, Maoning;Li, Chenyu;Zhang, Zhongxin;Dong, Wenzhao;Lei, Shi;Zhang, Xinyou;Li, Xiaona;Xue, Lulu;Han, Liu;Qu, Pengyu;Zhao, Huanhuan;Luo, Dandan;Wang, Xiaobo;Huang, Bingyan;Zhang, Maoning;Li, Chenyu;Zhang, Zhongxin;Dong, Wenzhao;Lei, Shi;Zhang, Xinyou
关键词：Peanut; AhFAD3-A01; ALA; Promoter; Arabidopsis
-
ESM-YOLOv11: A lightweight deep learning framework for real-time peanut leaf spot disease detection and precision severity quantification in field conditions
作者：Zhang, Yapeng;Li, Shangzhou;Feng, Sifan;Zhang, Juanjuan;Guo, Wei;Liu, Juan;Cui, Yanan;Liu, Haijiao;Sun, Ziqi;Cheein, Fernando Auat
关键词：Peanut; Leaf spot; YOLOv11; Disease severity assessment
-
Integrated metabolomic and transcriptomic analysis highlight the flavonoid response to antioxidant activity and Aspergillus flavus resistance in peanut seed coats
作者：Zhao, Xuejie;Xing, Minghui;Zhang, Lijing;Huang, Jinyong;Han, Suoyi;Zhang, Xinyou
关键词：Peanut; Metabolomics; Transcriptomic;
Aspergillus flavus ; Antioxidant activity; Flavonoid biosynthesis -
RNA-Seq Identification of Peanut Callus-Specific Promoters and Evaluation of Base-Editing Efficiency
作者：Xue, Lulu;Zhang, Xinyou;Xue, Lulu;Liu, Han;Zhao, Huanhuan;Qu, Pengyu;Li, Xiaona;Wang, Xiaobo;Huang, Bingyan;Sun, Ziqi;Han, Suoyi;Dai, Xiaodong;Dong, Wenzhao;Shi, Lei;Zhang, Xinyou;Wang, Xiaobo;Shi, Lei;Zhang, Xinyou
关键词：peanut; callus-specific promoter; off-target reduction; cytosine base editing; genome editing efficiency
-
Genome-Wide Identification, Evolution, and Expression Analysis of the DMP Gene Family in Peanut (Arachis hypogaea L.)
作者：Qu, Pengyu;He, Lina;Fu, Liuyang;Qu, Pengyu;He, Lina;Xue, Lulu;Liu, Han;Li, Xiaona;Zhao, Huanhuan;Han, Suoyi;Dai, Xiaodong;Dong, Wenzhao;Shi, Lei;Zhang, Xinyou;Xue, Lulu;Li, Xiaona
关键词：DMP; evolution; gene expression; haploid induction; peanut
-
Creation of fragrant peanut using CRISPR/Cas9
作者：Xue, Lulu;Qu, Pengyu;Zhao, Huanhuan;Liu, Han;Huang, Bingyan;Wang, Xiaobo;Zhang, Zhongxin;Dai, Xiaodong;Qin, Li;Dong, Wenzhao;Shi, Lei;Zhang, Xinyou;Xue, Lulu;Qu, Pengyu;Huang, Bingyan;Wang, Xiaobo;Zhang, Zhongxin;Dai, Xiaodong;Qin, Li;Dong, Wenzhao;Shi, Lei;Zhang, Xinyou;Wang, Xiaobo;Shi, Lei;Zhang, Xinyou
关键词：
-
Identification of oil content QTLs on Arahy12 and Arahy16, and development of KASP markers in cultivated peanut (Arachis hypogaea L.)
作者：Huang, Bingyan;Liu, Hua;Fang, Yuanjin;Miao, Lijuan;Qin, Li;Sun, Ziqi;Qi, Feiyan;Shi, Lei;Dong, Wenzhao;Zhang, Xinyou;Fang, Yuanjin;Chen, Lei;Zhang, Fengye;Wu, Jihua;Li, Shuanzhu;Zheng, Qinghuan
关键词：peanut; QTL; oil content; fatty acid composition; molecular markers
