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Genetic mapping of powdery mildew resistance genes in wheat landrace Guizi 1 via genotyping by sequencing

文献类型： 外文期刊

作者： Li, Luhua 1 ; Yang, Xicui 3 ; Wang, Zhongni 4 ; Ren, Mingjian 1 ; An, Chang 1 ; Zhu, Susong 4 ; Xu, Ruhong 1 ;

作者机构： 1.Guizhou Univ, Coll Agr, Guiyang 550025, Peoples R China

2.Natl Wheat Improvement Ctr, Guizhou Sub Ctr, Guiyang 550025, Peoples R China

3.Guizhou Agr Technol Extens Stn, Guiyang 550001, Peoples R China

4.Guizhou Acad Agr Sci, Guizhou Rice Res Inst, Guiyang 550006, Peoples R China

关键词： Wheat powdery mildew; Genotyping by sequencing; Single-nucleotide polymorphisms; Quantitative trait loci; Resistance

期刊名称：MOLECULAR BIOLOGY REPORTS （ 影响因子：2.742； 五年影响因子：2.702 ）

ISSN： 0301-4851

年卷期： 2022 年 49 卷 6 期

页码：

收录情况： SCI

摘要： Background Wheat (Triticum aestivum L.) powdery mildew (Pm), which caused by Blumeria graminis f. sp. tritici (Bgt), is a destructive disease worldwide that causes severe yield losses in wheat. Resistant wheat cultivars easily lose their ability to effectively resist newly emerged Bgt strains; therefore, identifying new resistance genes is necessary for breeding resistant cultivars. Methods and Results Guizi 1 (GZ1) is a Chinese wheat cultivar with moderate and stable resistance to Pm. Genetic analysis indicated that the Pm resistance of GZ1 was controlled by a single dominant gene, designated PmGZ1. In total, 110 F-2 individual plants and their 2 parents were subjected to genotyping by sequencing (GBS), which yielded 23,134 high-quality single-nucleotide polymorphisms (SNPs). The SNP distributions across the 21 chromosomes ranged from 134 on chromosome 6D to 6288 on chromosome 3B. Chromosome 6A has 1866 SNPs, among which 16 are physically located between positions 307,802,221 and 309,885,836 in an approximate 2.3-cM region; this region also had the greatest SNP density. The average map distance between SNP markers was 0.1 cM. A quantitative trait locus (QTL) with a significant epistatic effect on Pm resistance was mapped to chromosome 6A. The logarithm of odds (LOD) value of PmGZ1 was 34.8, and PmGZ1 was located within the confidence interval marked by chr6a-307802221 and chr6a-309885836. Moreover, 74.7% of the phenotypic variance was explained by PmGZ1. Four candidate genes (which encoded two TaAP2-A and two actin proteins) were annotated maybe as resistance genes. Conclusions The present results provide valuable information for wheat genetic improvement, QTL fine mapping, and candidate gene validation.

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