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Bioinformatics Analysis of WRKY Family Genes in Flax (Linum usitatissimum)

文献类型： 外文期刊

作者： An, Xia 1 ; Liu, Qin 1 ; Jiang, Hui 2 ; Dong, Guoyun 3 ; Tian, Danqing 1 ; Luo, Xiahong 1 ; Chen, Changli 1 ; Li, Wenlue 1 ; Liu, Tingting 1 ; Zou, Lina 1 ; Ying, Jinyao 4 ; Zhou, Huaping 4 ; Zhu, Xuan 5 ; Chen, Xiaoyan 5 ;

作者机构： 1.Zhejiang Acad Agr Sci, Zhejiang Xiaoshan Inst Cotton & Bast Fiber Crops, Zhejiang Inst Landscape Plants & Flowers, Hangzhou 311251, Peoples R China

2.Henan Acad Agr Sci, Zhengzhou 450002, Peoples R China

3.Zhangjiajie Res Inst Agr Sci & Technol, Zhangjiajie 427000, Peoples R China

4.Hangzhou Xiaoshan Dist Agr Forestry Technol Promot, Hangzhou 311203, Peoples R China

5.Dali Bai Autonomous Prefecture Agr Sci Extens Res, Dali 671699, Peoples R China

关键词： flax; WRKY; transcription factor; gene family

期刊名称：LIFE-BASEL （ 影响因子：3.2； 五年影响因子：3.2 ）

ISSN：

年卷期： 2023 年 13 卷 6 期

页码：

收录情况： SCI

摘要： WRKY gene family is one of the largest transcription factor families involved in various physiological processes of plants. Flax (Linum usitatissimum) is an important stem fiber crop, and it is also an economically important crop in natural fiber and textile industries around the world. In this study, 105 WRKY genes were obtained by screening the whole genome of flax. There were 26 in group I, 68 in group II, 8 in group III and 3 in group UN. The characteristics of the WRKY motif and gene structure in each group are similar. The promoter sequence of WRKY genes includes photoresponsive elements, core regulatory elements and 12 cis-acting elements under abiotic stress. Similar to A. thaliana and Compositae plants, WRKY genes are evenly distributed on each chromosome, with segmental and tandem repeated events, which play a major role in the evolution of WRKY genes. The flax WRKY gene family is mainly concentrated in group I and group II. This study is mainly based on genome-wide information to classify and analyze the flax WRKY gene family, laying a foundation for further understanding the role of WRKY transcription factors in species evolution and functional analysis.

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