文献类型： 外文期刊
作者： Zhou, Sicong 1 ; Luo, Guanghua 1 ; Yang, Qiong 2 ; Han, Yangchun 1 ; Yuan, Kaili 1 ; Ji, Rui 1 ; Fang, Jichao 1 ;
作者机构： 1.Jiangsu Acad Agr Sci, Inst Plant Protect, Jiangsu Key Lab Food Qual & Safety, State Key Lab Cultivat Base Minist Sci & Technol, Nanjing 210014, Peoples R China
2.Univ Melbourne, Bio21 Inst, Sch BioSci, Parkville, Vic 3010, Australia
3.Integrated Tech Serv Ctr Jiangyin Customs, Jiangyin 214441, Peoples R China
4.Huaiyin Normal Univ, Jiangsu Collaborat Innovat Ctr Reg Modern Agr & En, Huaian 223001, Peoples R China
期刊名称：SCIENTIFIC DATA （ 影响因子：9.8； 五年影响因子：10.8 ）
ISSN：
年卷期： 2024 年 11 卷 1 期
页码：
收录情况： SCI
摘要： The yellow stem borer Scirpophaga incertulas is the dominant pest of rice in tropical Asia. However, the lack of genomic resources makes it difficult to understand their invasiveness and ecological adaptation. A high-quality chromosome-level genome of S. incertulas, a monophagous rice pest, was assembled by combining Illumina short reads, PacBio HiFi long sequencing, and Hi-C scaffolding technology. The final genome size was 695.65 Mb, with a scaffold N50 of 28.02 Mb, and 93.50% of the assembled sequences were anchored to 22 chromosomes. BUSCO analysis demonstrated that this genome assembly had a high level of completeness, with 97.65% gene coverage. A total of 14,850 protein-coding genes and 366.98 Mb of transposable elements were identified. In addition, comparative genomic analyses indicated that chemosensory processes and detoxification capacity may play critical roles in the specialized host preference of S. incertulas. In summary, the chromosome-level genome assembly of S. incertulas provides a valuable genetic resource for understanding the biological characteristics of its invasiveness and developing an efficient management strategy.
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