The dynamic transcriptome of pepper (Capsicum annuum) whole roots reveals an important role for the phenylpropanoid biosynthesis pathway in root resistance to Phytophthora capsici
文献类型： 外文期刊
作者： Li, Ying 1 ; Yu, Ting 2 ; Wu, Tingquan 1 ; Wang, Rui 1 ; Wang, Hengming 1 ; Du, Hu 1 ; Xu, Xiaowan 1 ; Xie, Dasen 1 ; Xu, Xi 1 ;
作者机构： 1.Guangdong Acad Agr Sci, Vegetables Res Inst, Guangzhou 510640, Peoples R China
2.Guangdong Acad Agr Sci, Agrobiol Gene Res Ctr, Guangzhou 510640, Peoples R China
3.Guangdong Key Lab New Technol Res Vegetables, Guangzhou 510640, Peoples R China
关键词： Capsicum annuum; Phytophthora root rot; Root-mediated resistance; RNA-Seq; Secondary metabolites
期刊名称：GENE （ 影响因子：3.688； 五年影响因子：3.329 ）
ISSN： 0378-1119
年卷期： 2020 年 728 卷
页码：
收录情况： SCI
摘要： Phytophthora root rot, caused by the soilborne oomycete pathogen Phytophthora capsici (Leon.), is a devastating disease causing significant losses in pepper production worldwide. To uncover the mechanism of root-mediated resistance to P. capsici we elucidated the dynamic transcriptome of whole pepper roots of the resistant accession CM334 and the susceptible accession NMCA10399 after P. capsici infection at 0, 12 and 36 hpi using RNA-Seq method. We detected that the roots of the resistant CM334 and the susceptible NMCA10399 had different transcriptional responses to P. capsici, suggesting the former activated a response to P. capsici earlier than the latter. KEGG enrichment analysis showed the pathways involved in the synthesis of secondary metabolites were those in which the most DEGs were enriched. Focusing on the gene regulation of phenylpropanoid biosynthesis-related genes, we found genes related to the key enzyme phenylalanine ammonia-lyase (PAL) were activated earlier with greater changes in the resistant accession than in the susceptible one. Moreover, genes related to cinnamoyl-CoA reductase (CCR1) were also upregulated in resistant roots but downregulated with great folder changes in susceptible roots. Briefly, we inferred that the phenylpropanoid biosynthesis pathway, especially cinnamaldehyde and lignin derived from its branches, played significant roles in pepper root resistance to P. capsici. These results provide new insight into root-mediated resistance to P. capsici in pepper.
- 相关文献
作者其他论文 更多>>
-
Transcriptomic analysis reveals the molecular basis of photoperiod-regulated sex differentiation in tropical pumpkins (Cucurbita moschata Duch.)
作者：Xue, Shudan;Huang, Hexun;Xu, Yingchao;Liu, Ling;Meng, Qitao;Zhu, Jitong;Zhou, Meijiang;Du, Hu;Yao, Chunpeng;Jin, Qingmin;Zhong, Yujuan;Meng, Qitao;Nie, Chengrong
关键词：Photoperiod; Cucurbita moschata; Sex differentiation; Photoperiod-mediated flowering processes; Gibberellin signaling pathway; Ethylene biosynthetic and ethylene response pathways
-
Identification of the G2-like transcriptional factor gene family reveals their critical roles in controlling chlorophyll accumulation of melon fruit
作者：Cao, Haishun;Wu, Tingquan;Zhang, Changyuan;Shi, Liangliang;Gong, Mingxi;Anwar, Ali;Song, Shiwei
关键词：G2-like transcription factors; Melon; Chlorophyll; Fruit peel; GLKs; APRR2
-
Rapid Construction and Application of a Vector for Tobacco Ringspot Virus-Induced McPDS Silencing in Bitter Gourd
作者：Zeng, Lingen;Deng, Zhijun;Zeng, Lingen;Zhang, Hui;Liu, Hongbiao;Du, Hu;Zhong, Yujuan;Yao, Chunpeng;Zhang, Hui;Guo, Jinju;Zhang, Changyuan
关键词：bitter gourd; virus-induced gene silencing; TRSV; phytoene dehydrogenase
-
Genome-wide identification and expression analysis of the cryptochromes reveal the CsCRY1 role under low-light-stress in cucumber
作者：Cao, Haishun;Wang, Rui;Zhao, Junhong;Shi, Liangliang;Wu, Tingquan;Zhang, Changyuan;Huang, Yuan
关键词：cryptochromes; cucumber; low-light-stress; photoreceptors; alternative splicing
-
Potential locus W and candidate gene McPRR2 associated with pericarp pigment accumulation in bitter gourd (Momordica charantia L.) revealed via BSA-seq analysis
作者：Guo, Jinju;Han, Xin;Wu, Tingquan;Wang, Rui;Zhao, Junhong;Wang, Rufang;Tan, Delong;Zhang, Huiyao;Zhang, Changyuan;Yan, Shijuan;Huang, Wenjie;Gao, Jie
关键词：Bitter gourd; BSA-seq; McPRR2; Chlorophyll; Pericarp color
-
Time-course transcriptome analysis of the two types of seeds provides insights into seed shape differentiation in wax gourd
作者：Luo, Chen;Yan, Jinqiang;Wang, Min;Liu, Wenrui;Xie, Dasen;Jiang, Biao;Li, Zheng
关键词：Wax gourd; Seed shape; Transcriptome; Differentially expressed genes
-
Chromosome-level genome assembly and population genomics reveals crucial selection for subgynoecy development in chieh-qua
作者：Wang, Min;Cao, Zhenqiang;Jiang, Biao;Xie, Dasen;Chen, Lin;Shi, Shaoqi;Yang, Songguang;Peng, Qingwu;Wang, Kejian;Lu, Hongwei
关键词：
