Development of a real-time reverse transcription recombinase polymerase amplification assay for rapid detection of spring viremia of carp virus
文献类型： 外文期刊
作者： Cong, Feng 2 ; Zeng, Fanwen 2 ; Wu, Miaoli 2 ; Wang, Jingjing 5 ; Huang, Bihong 2 ; Wang, Yingying 1 ; Wang, Qing 1 ; Zha 1 ;
作者机构： 1.Chinese Acad Fishery Sci, Guangdong Prov Pearl River Fisheries Res Inst, Key Lab Fishery Drug Dev, Key Lab Aquat Anim Immune Technol,Minist Agr, Guangzhou 510380, Peoples R China
2.Guangdong Lab Anim Monitoring Inst, Guangzhou 510633, Peoples R China
3.Guangdong Prov Key Lab Lab Anim, Guangzhou 510633, Peoples R China
4.South China Agr Univ, Coll Anim Sci, Guangzhou 510640, Peoples R China
5.Jiangsu Ctr Control & Prevent Aquat Anim Infect D, Nanjing 210000, Peoples R China
关键词： SVCV; Real-time RT-RPA; Rapid detection; Diagnosis
期刊名称：MOLECULAR AND CELLULAR PROBES （ 影响因子：2.365； 五年影响因子：2.386 ）
ISSN： 0890-8508
年卷期： 2020 年 50 卷
页码：
收录情况： SCI
摘要： Spring viremia of carp virus (SVCV) is a significant pathogenic agent that can cause large-scale outbreaks of spring viremia of carp (SVC) in many types of fish and bring huge economic losses to the aquaculture industry. A simple and convenient detection method is imperative for SVCV diagnosis. In this study, the real-time reverse transcription recombinase polymerase amplification (RT-RPA) assay was developed and validated. Primers and probe targeting the conserved region of M gene were designed and applied to the real-time RT-RPA assay that performed at 39 degrees C for 20 min. The specificity analysis showed that no cross-reaction with other pathogenic viruses of fish was found, indicating appropriate specificity of the assay. In vitro transcribed RNA standards were used to estimate the sensitivity of the assay and the detection limit was 10(2)copies/reaction. To further evaluate the assay, 65 clinical samples were tested using both real-time RT-RPA assay and real-time RT-PCR method. The same detection results were observed, suggesting the potential application of real-time RT-RPA assay in clinical sample detection. This is the first report on RPA assay for SVCV detection and this new developed assay would be useful in both laboratory and in the field for diagnosis of SVCV.
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