A Comparative Transcriptome Analysis of Volvariella volvacea Identified the Candidate Genes Involved in Fast Growth at the Mycelial Growth Stage
文献类型： 外文期刊
作者： Liu, Ming 1 ; Yu, Ting 2 ; Singh, Puneet Kumar 3 ; Liu, Qinjian 2 ; Liu, Hao 3 ; Zhu, Qingfeng 2 ; Xiao, Zitian 1 ; Xu, J 1 ;
作者机构： 1.Guangdong Acad Agr Sci, Guangdong Key Lab New Technol Res Vegetables, Vegetables Res Inst, Guangzhou 510640, Peoples R China
2.Guangdong Acad Agr Sci, Agrobiol Gene Res Ctr, Guangzhou 510640, Peoples R China
3.South China Univ Technol, Sch Light Ind & Engn, Guangzhou 510640, Peoples R China
4.Michigan State Univ, Dept Microbiol & Mol Genet, E Lansing, MI 48824 USA
关键词： Volvariella volvacea; transcriptome; growth performance
期刊名称：GENES （ 影响因子：4.096； 五年影响因子：4.339 ）
ISSN：
年卷期： 2020 年 11 卷 2 期
页码：
收录情况： SCI
摘要： The edible straw mushroom, Volvariella volvacea, is one of the most important cultivated mushrooms in tropical and sub-tropical regions. Strain improvement for V. volvacea is difficult because of the unknown mechanisms involved in its growth regulation and substrate utilization. A comparative physiological and transcriptomic study was conducted between two commercially available straw mushroom strains (v9 and v26) to explore their fast-growth regulation mechanism(s). The physiological study showed that V. volvacea v9 had a shorter growth cycle and higher biological efficiency (4% higher) than that in v26. At least 14,556 unigenes were obtained from the four cDNA libraries (two replicates per strain). Among them, the expression of 1597 unigenes was up-regulated while 1352 were down-regulated. Four heat-shock proteins were highly expressed in v9, showing that v9 has the better ability to handle stresses and/or environmental changes. Moreover, up to 14 putative transporter genes were expressed at a higher level in v9 than those in v26, implying that v9 has a better ability to transport nutrients or export xenobiotics efficiently. Our report allows to identify the candidate genes involved in the fast growth requirement of V. volvacea, which represents a valuable resource for strain improvement in this commercially important edible mushroom.
- 相关文献
作者其他论文 更多>>
-
OsRHS Negatively Regulates Rice Heat Tolerance at the Flowering Stage by Interacting With the HSP Protein cHSP70-4
作者：Mao, Xingxue;Yu, Hang;Zhang, Lanlan;Lv, Shuwei;Jiang, Liqun;Zhang, Jing;Sun, Bingrui;Li, Chen;Ma, Yamei;Liu, Qing;Xue, Jiao;Zhu, Qingfeng;Feng, Yanzhao;Yu, Yang
关键词：flowering stage; heat tolerance; HSP70; OsRHS; PME; rice
-
Integrated metabolomic and transcriptomic analysis of Pogostemon cablin shed new light on the complete biosynthesis pathway of pogostone
作者：Wang, Sen;Zeng, Zhaoqi;Zhang, Qi;Liu, Wenhua;Liu, Qinjian;Xie, Chong;Bei, Jinlong;Chen, Bingxian;Zhang, Aixia;Zeng, Zhaoqi;Xie, Chong
关键词：patchoulol; pogostone; biosynthesis; key enzyme; transcriptomics; patchouli; metabolomics
-
Pretreatment with nano-silver extends the post-harvest longevity of gladiolus cut flowers by reducing free water mobility
作者：Li, Xiumei;Liu, Qinjian;Chen, Yuanyuan;Chen, Zhongjian;Liu, Jun;Yan, Shijuan;Li, Hongbo;He, Shenggen
关键词：Water state; Nanoparticles; Vase life; Nuclear magnetic resonance; Cut flowers
-
Quality Grading of Oudemansiella raphanipes Using Three-Teacher Knowledge Distillation with Cascaded Structure for LightWeight Neural Networks
作者：Chen, Haoxuan;Peng, Yangyang;Zhou, Hui;Liu, Ming;Chen, Haoxuan;Huang, Huamao;Hu, Haiying
关键词：
Oudemansiella raphanipes ; quality grading; knowledge distillation; multi-teacher model -
Integration of single-nuclei transcriptome and bulk RNA-seq to unravel the role of AhWRKY70 in regulating stem cell development in Arachis hypogaea L.
作者：Wang, Xinyang;Wang, Runfeng;Zhou, Yueni;Umer, Muhammad J.;Jin, Weicai;Huang, Lu;Li, Haifen;Yu, Qianxia;Li, Shaoxiong;Hong, Yanbin;Chen, Xiaoping;Lu, Qing;Liu, Hao;Wang, Xinyang;Huo, Xing;Zheng, Zihao;Varshney, Rajeev K.;Wang, Wenyi;Xiao, Yuan
关键词：peanut seedling; single-nuclei RNA-seq (snRNA-seq); stem growth; WRKY protein; phytohormone
-
Chemical profile changes in Peanut seeds infected with aspergillus flavus via widely targeted metabolomics
作者：Zhou, Yueni;Umer, Muhammad J.;Wang, Runfeng;Li, Shaoxiong;Lu, Qing;Hong, Yanbin;Chen, Xiaoping;Liu, Hao;Xu, Mengyun;Xiao, Yuan;Zheng, Zihao;Huai, Dongxin
关键词：Peanut seeds; Aspergillus flavus; Metabolomics; Phenolic acids; Biomarker
-
Transcriptomic insights into the synergistic effects of darkness and mechanical stimulation on peanut pod development
作者：Huang, Lu;Umer, Muhammad J.;Liu, Hao;Li, Haifen;Wang, Runfeng;Yu, Qianxia;Li, Shaoxiong;Hong, Yanbin;Lu, Qing;Chen, Xiaoping;Varshney, Rajeev K.;Pandey, Manish K.
关键词：Peanut; Mechanical stimulation; Environment; Pod development; Gene modules
