Genomic resequencing reveals genetic diversity, population structure, and core collection of durian germplasm
文献类型： 外文期刊
作者： Zhong, Yiwang 1 ; Feng, Liying 3 ; Deng, Huidong 2 ; Ji, Xiaohao 5 ; Zhang, Jing 1 ; Sun, Yangyang 1 ; Lin, Peifan 7 ; Qiao, Yang 2 ; Xie, Shenghua 1 ; Wang, Haibo 5 ; Guo, Lijun 2 ; Feng, Xuejie 1 ;
作者机构： 1.Hainan Acad Agr Sci, Sanya Inst, Sanya, Peoples R China
2.Hainan Acad Agr Sci, Inst Trop Fruit Trees, Haikou 571100, Peoples R China
3.Yazhouwan Natl Lab, Sanya, Peoples R China
4.Minist Agr & Rural Affairs, Key Lab Genet Resources Evaluat & Utilizat Trop Fr, Haikou, Peoples R China
5.Chinese Acad Agr Sci, Res Inst Pomol, Xingcheng 125100, Peoples R China
6.Minist Agr & Rural Affairs Peoples Republ China, Key Lab Hort Crops Germplasm Resources Utilizat, Xingcheng, Peoples R China
7.Key Lab Southern Subtrop Plant Divers, Fairy Lake Bot Garden, Shenzhen, Peoples R China
8.Chinese Acad Sci, Shenzhen, Peoples R China
9.Key Lab Trop Fruit Tree Biol Hainan Prov, Haikou, Peoples R China
期刊名称：COMMUNICATIONS BIOLOGY （ 影响因子：5.1； 五年影响因子：5.8 ）
ISSN：
年卷期： 2025 年 8 卷 1 期
页码：
收录情况： SCI
摘要： Durio zibethinus Murr. is a tropical fruit crop of growing global importance, prized for its unique flavor and nutritional value. Yet only a narrow genetic base has been utilized in breeding efforts. We performed whole-genome resequencing of 114 diverse durian accessions collected in China, identifying over 39 million high-quality SNPs across the genome, revealing genome-wide patterns of diversity. Population structure analysis revealed three major genetic clusters, supported by PCA, phylogenetic analysis, and STRUCTURE modeling. Genome-wide scans identified candidate selective sweeps, and several genes potentially under selection. From the 114 accessions, we further identified a core collection of representative durian germplasms capturing the majority of the species' genetic diversity. This subset includes both elite cultivars and genetically distinct individuals. Our study provides insights into the genetic diversity and population structure of cultivated durian. The defined core collection and genomic variation map establish a valuable resource for durian breeding and germplasm conservation. These findings will facilitate the identification of superior alleles for important traits and guide future durian improvement programs.
- 相关文献
作者其他论文 更多>>
-
Effect of electron beam irradiation treatment on microstructure, physicochemical properties, and bioactive content of areca nut
作者：Dai, Jiahui;Kang, Xiaoning;Dai, Wenting;Ji, Jianbang;Wang, Shiping;Dai, Jiahui;Kang, Xiaoning;Dai, Wenting;Ji, Jianbang;Wang, Shiping;Kang, Xiaoning;Zhang, Jing;Ji, Jianbang;Wang, Yanan;Sun, Yicheng;Wang, Yijue;Qin, Hongjian
关键词：electron beam irradiation; areca nut processing; fiber; microstructure; physicochemical properties
-
Assembly and analysis of the first complete mitochondrial genome sequencing of main Tea-oil Camellia cultivars Camellia drupifera (Theaceae): revealed a multi-branch mitochondrial conformation for Camellia
作者：Liang, Heng;Qi, Huasha;Chen, Jiali;Sun, Xiuxiu;Wang, Chunmei;Xia, Tengfei;Zheng, Daojun;Liu, Moyang;Chen, Cheng;Liang, Heng;Qi, Huasha;Chen, Jiali;Sun, Xiuxiu;Wang, Chunmei;Xia, Tengfei;Feng, Xuejie;Zheng, Daojun;Liang, Heng;Qi, Huasha;Chen, Jiali;Sun, Xiuxiu;Wang, Chunmei;Xia, Tengfei;Zheng, Daojun;Liang, Heng;Qi, Huasha;Chen, Jiali;Sun, Xiuxiu;Wang, Chunmei;Xia, Tengfei;Zheng, Daojun;Feng, Shiling;Wang, Yidan
关键词：Mitochondrial genome; Tea-oil Camellia; Comparative genomics
-
A New Leaf Spot Disease Caused by Alternaria jacinthicola on Durio zibethinus in China
作者：Dong, Ganggang;Xue, Mingshuo;Fan, Zaifeng;Dong, Ganggang;Xue, Mingshuo;Fan, Zaifeng;Xie, Shenghua;Feng, Xuejie;Li, Xianghong
关键词：
Alternaria jacinthicola ; durian; identification; pathogen isolation; pathogenicity -
Evaluation of Metabolites and Biological Activities of Areca Nut (Areca catechu L.) Under Different pH: Untargeted Mass Spectrometry-Based Metabolomics Approach
作者：Zhang, Jing;Dai, Jiahui;Wang, Shiping;Rui, Kai;Dai, Wenting;Kang, Xiaoning;Ji, Jianbang;Zhang, Jing;Zhang, Jing;Dai, Jiahui;Wang, Shiping;Dai, Wenting;Kang, Xiaoning;Wang, Weizhong
关键词：active ingredient; antioxidant activity; metabolite; substance basis
-
Genome-wide identification of SABATH gene family in soybean relate to salt, aluminum, chromium toxicity
作者：Wen, Ke;Zhong, Wangyi;Wu, Zhuangsheng;Chen, Yisong;Liao, Daolong;Wen, Ke;Zhong, Wangyi;Wu, Zhuangsheng;Chen, Yisong;Liao, Daolong;Wen, Ke;Zhong, Wangyi;Wu, Zhuangsheng;Chen, Yisong;Liao, Daolong;Wen, Ke;Zhong, Wangyi;Wu, Zhuangsheng;Chen, Yisong;Liao, Daolong;Feng, Liying;Han, Tiantian;Suo, Haicui;Ren, Hailong;Yuan, Qinghua;Wen, Ke;Li, Xingang
关键词：
SABATH gene family; Soybean; Abiotic stress; Transcriptome analysis; Gene expression -
Investigating the influence of 60Co irradiation on the aging aroma components of soy sauce aroma type baijiu by integrating E-nose, GC-MS, GC-IMS, and chemometric methods
作者：Dai, Jiahui;Yang, Ling;Wang, Shiping;Dai, Jiahui;Gan, Xin;Wang, Shiping;Zhang, Jing;Tang, Wangping;Wang, Yanan;Sun, Yicheng;Wang, Yijue;Qin, Hongjian
关键词：Chinese soy sauce aroma type baijiu; E -nose; HS-SPME-GC-MS; GC-IMS; Volatile flavor compound; 60 Co irradiation; aging
-
Targeted Metabolomics Combined with OPLS-DA to Elucidate Phenolic Differences in Eight Cashew Apples
作者：Huang, Haijie;Huang, Weijian;Zhang, Zhongrun;Huang, Haijie;Ma, Huifang;Liu, Yijun;Huang, Haijie;Feng, Xuejie;Hu, Fuchu;Zhao, Ya;Ye, Yingjun;Zhao, Li;Chen, Liming
关键词：cashew apple; LC-MS/MS; phenolics; metabolism
