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Relaxed purifying selection pressure drives accelerated and dynamic gene rearrangements in thrips (Insecta: Thysanoptera) mitochondrial genomes

文献类型： 外文期刊

作者： Liu, Qiaoqiao 1 ; Cai, Yao D. 2 ; Ma, Ling 1 ; Liu, Hangrui 3 ; Linghu, Tianye 1 ; Guo, Shaokun 4 ; Wei, Shujun 5 ; Song, Fan 1 ; Tian, Li 1 ; Cai, Wanzhi 1 ; Li, Hu 1 ;

作者机构： 1.China Agr Univ, Coll Plant Protect, Dept Entomol, Beijing 100193, Peoples R China

2.Univ Calif Davis, Coll Agr & Environm Sci, Dept Entomol & Nematol, One Shields Ave, Davis, CA 95616 USA

3.Macquarie Univ, Dept Phys & Astron, Sydney, NSW 2109, Australia

4.China Agr Univ, Coll Plant Protect, Key Lab Surveillance & Management Plant Quarantine, Dept Plant Biosecur,Minist Agr & Rural Affairs, Beijing 100193, Peoples R China

5.Beijing Acad Agr & Forestry Sci, Inst Plant Protect, Beijing 100097, Peoples R China

关键词： Mitochondrial genome; Gene rearrangement; Selection pressure

期刊名称：INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES （ 影响因子：8.2； 五年影响因子：7.8 ）

ISSN： 0141-8130

年卷期： 2023 年 253 卷

页码：

收录情况： SCI

摘要： Insect mitochondrial genomes (mitogenome) generally present a typical gene order, which is considered as the ancestral arrangement. All sequenced mitogenomes in the Thysanoptera display high levels of gene rearrangement. Due to limited number of thrips mitogenomes sequenced, how gene rearrangement may be shaped by evolution remain unclear. Here, we analyzed 33 thrips mitogenomes, including 14 newly sequenced. These mitogenomes were diverse in organization, nucleotides substitution and gene arrangements. We found 28 highly rearranged gene orders with the breakpoints of gene rearrangements from 25 to 33. Reconstruction of the ancestors mitochondrial gene arrangements states indicated that Tubulifera have more complex pathways than Terebrantia in the gene order evolution. Molecular calibration estimated that divergence of two suborders occurred in the middle Triassic while the radiation of thrips was associated with the arose and flourish of angiosperm. Our evolutionary hypothesis testing suggests that relaxation of selection pressure enabled the early phase of Thysanoptera evolution, followed by a stronger selective pressure fixed diversification. Our analyses found gene inversion increases the nonsynonymous substitution rates and provide an evolutionary hypothesis driving the diverse gene orders.

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