Comparative transcriptome analysis reveals key pathways and regulatory networks in early resistance of Glycine max to soybean mosaic virus
文献类型： 外文期刊
作者： Li, Han 1 ; Liu, Jinyang 2 ; Yuan, Xingxing 2 ; Chen, Xin 1 ; Cui, Xiaoyan 2 ;
作者机构： 1.Nanjing Agr Univ, Coll Life Sci, Nanjing, Peoples R China
2.Jiangsu Acad Agr Sci, Inst Ind Crops, Jiangsu Key Lab Hort Crop Genet Improvement, Nanjing, Peoples R China
3.Nanjing Agr Univ, Coll Plant Protect, Nanjing, Peoples R China
关键词： soybean; soybean mosaic virus; RNA sequencing; DEGs; PPI network
期刊名称：FRONTIERS IN MICROBIOLOGY （ 影响因子：5.2； 五年影响因子：6.2 ）
ISSN：
年卷期： 2023 年 14 卷
页码：
收录情况： SCI
摘要： As a high-value oilseed crop, soybean [Glycine max (L.) Merr.] is limited by various biotic stresses during its growth and development. Soybean mosaic virus (SMV) is a devastating viral infection of soybean that primarily affects young leaves and causes significant production and economic losses; however, the synergistic molecular mechanisms underlying the soybean response to SMV are largely unknown. Therefore, we performed RNA sequencing on SMV-infected resistant and susceptible soybean lines to determine the molecular mechanism of resistance to SMV. When the clean reads were aligned to the G. max reference genome, a total of 36,260 genes were identified as expressed genes and used for further research. Most of the differentially expressed genes (DEGs) associated with resistance were found to be enriched in plant hormone signal transduction and circadian rhythm according to Kyoto Encyclopedia of Genes and Genomes analysis. In addition to salicylic acid and jasmonic acid, which are well known in plant disease resistance, abscisic acid, indole-3-acetic acid, and cytokinin are also involved in the immune response to SMV in soybean. Most of the Ca2+ signaling related DEGs enriched in plant-pathogen interaction negatively influence SMV resistance. Furthermore, the MAPK cascade was involved in either resistant or susceptible responses to SMV, depending on different downstream proteins. The phytochrome interacting factor-cryptochrome-R protein module and the MEKK3/MKK9/MPK7-WRKY33-CML/CDPK module were found to play essential roles in soybean response to SMV based on protein-protein interaction prediction. Our findings provide general insights into the molecular regulatory networks associated with soybean response to SMV and have the potential to improve legume resistance to viral infection.
- 相关文献
作者其他论文 更多>>
-
Construction of a high-density genetic map for yardlong bean and identification of ANT1 as a regulator of anthocyanin biosynthesis
作者：Zhang, Hongmei;Zhang, Wei;Liu, Xiaoqing;Chen, Xin;Chen, Huatao;Meng, Shan;Yan, Wei;Hui, Linchong;Chen, Wei
关键词：
-
Occurrence, distribution, and genetic diversity of faba bean viruses in China
作者：Li, Zongdi;Qin, Jiachao;Zhu, Yuxiang;Zhou, Mimi;Chen, Xin;Cui, Xiaoyan;Li, Zongdi;Zhao, Na;Zhou, Enqiang;Wang, Xuejun
关键词：faba bean; viruses; small RNA sequencing; incidence; distribution; genetic diversity; China
-
Two genes encoding caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1) are candidate genes for physical seed dormancy in cowpea (Vigna unguiculata (L.) Walp.)
作者：Laosatit, Kularb;Amkul, Kitiya;Somta, Prakit;Lin, Yun;Yuan, Xingxing;Chen, Xin
关键词：
-
Genome-Wide Association Study and Identification of Candidate Genes Associated with Seed Number per Pod in Soybean
作者：Wang, Qiong;Zhang, Wei;Xu, Wenjing;Zhang, Hongmei;Liu, Xiaoqing;Chen, Xin;Chen, Huatao;Chen, Huatao
关键词：soybean; seed number per pod; leaf characteristics; genome-wide association study; single nucleotide polymorphism
-
Comparative transcriptome analysis between two different cadmium-accumulating genotypes of soybean (Glycine max) in response to cadmium stress
作者：Liu, Xiaoqing;Zhang, Hongmei;Zhang, Wei;Jia, Qianru;Chen, Xin;Chen, Huatao
关键词：Cadmium; Differentially expressed genes; Soybean; Transcriptome
-
Identification of a Branch Number Locus in Soybean Using BSA-Seq and GWAS Approaches
作者：Dai, Dongqing;Huang, Lu;Zhang, Xiaoyan;Zhang, Shiqi;Yuan, Yuting;Wu, Gufeng;Hou, Yichen;Yuan, Xingxing;Chen, Xin;Xue, Chenchen
关键词：soybean; branch number; GWAS; BSA; QTL
-
High internal phase Pickering emulsions stabilized by the complexes of ultrasound-treated pea protein isolate/mung bean starch for delivery of 0-carotene
作者：Li, Shiyu;Su, Hang;Yao, Yang;Zhu, Yingying;Hao, Xiyu;Chen, Xin
关键词：Pea protein isolate; Ultrasound; Mung bean starch; High internal phase Pickering emulsions; 0-Carotene delivery
