Genome-wide analysis and identification of stress-responsive genes of the CCCH zinc finger family in Capsicum annuum L.
文献类型： 外文期刊
作者： Tang, Wenchen 1 ; Hao, Yupeng 1 ; Ma, Xinyu 1 ; Shi, Yiqi 1 ; Dang, Yongmeng 1 ; Dong, Zeyu 1 ; Zhao, Yongyan 1 ; Zhao, Tianlun 1 ; Zhu, Shuijin 1 ; Zhang, Zhiyuan 1 ; Gu, Fenglin 2 ; Liu, Ziji 3 ; Chen, Jinhong 1 ;
作者机构： 1.Zhejiang Univ, Hainan Inst, Sanya, Peoples R China
2.Chinese Acad Trop Agr Sci, Spice & Beverage Res Inst, Sanya Res Inst, Hainan Key Lab Biosafety Monitoring & Mol Breeding, Sanya, Peoples R China
3.Chinese Acad Trop Agr Sci, Trop Crops Genet Resources Inst, Key Lab Crop Gene Resources & Germplasm Enhancemen, Minist Agr, Haikou, Peoples R China
4.Zhejiang Univ, Coll Agr & Biotechnol, Hangzhou, Peoples R China
关键词： gene family; CCCH; phylogenetic analysis; Capsicum annuum; stress
期刊名称：FRONTIERS IN PLANT SCIENCE （ 影响因子：5.6； 五年影响因子：6.8 ）
ISSN： 1664-462X
年卷期： 2023 年 14 卷
页码：
收录情况： SCI
摘要： The CCCH zinc finger gene family encodes a class of proteins that can bind to both DNA and RNA, and an increasing number of studies have demonstrated that the CCCH gene family plays a key role in growth and development and responses to environmental stress. Here, we identified 57 CCCH genes in the pepper (Capsicum annuum L.) genome and explored the evolution and function of the CCCH gene family in C. annuum. Substantial variation was observed in the structure of these CCCH genes, and the number of exons ranged from one to fourteen. Analysis of gene duplication events revealed that segmental duplication was the main driver of gene expansion in the CCCH gene family in pepper. We found that the expression of CCCH genes was significantly up-regulated during the response to biotic and abiotic stress, especially cold and heat stress, indicating that CCCH genes play key roles in stress responses. Our results provide new information on CCCH genes in pepper and will aid future studies of the evolution, inheritance, and function of CCCH zinc finger genes in pepper.
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