文献类型： 外文期刊
作者： Song, Wei 1 ; Cao, Li-Jun 1 ; Chen, Jin-Cui 1 ; Bao, Wen-Xue 2 ; Wei, Shu-Jun 1 ;
作者机构： 1.Beijing Acad Agr & Forestry Sci, Inst Plant Protect, Beijing 100097, Peoples R China
2.Inner Mongolia Agr Univ, Coll Forestry, Hohhot 010019, Peoples R China
期刊名称：SCIENTIFIC DATA （ 影响因子：5.8； 五年影响因子：8.9 ）
ISSN：
年卷期： 2024 年 11 卷 1 期
页码：
收录情况： SCI
摘要： The western flower thrips Frankliniella occidentalis (Thysanoptera: Thripidae) is a global invasive species that causes increasing damage by direct feeding on crops and transmission of plant viruses. Here, we assemble a previously published scaffold-level genome into a chromosomal level using Hi-C sequencing technology. The assembled genome has a size of 302.58 Mb, with a contig N50 of 1533 bp, scaffold N50 of 19.071 Mb, and BUSCO completeness of 97.8%. All contigs are anchored on 15 chromosomes. A total of 16,312 protein-coding genes are annotated in the genome with a BUSCO completeness of 95.2%. The genome contains 492 non-coding RNA, and 0.41% of interspersed repeats. In conclusion, this high-quality genome provides a convenient and high-quality resource for understanding the ecology, genetics, and evolution of thrips.
- 相关文献
作者其他论文 更多>>
-
Hierarchical architecture of neo-sex chromosomes and accelerated adaptive evolution in tortricid moths
作者：Yang, Fangyuan;Cao, Li-Jun;Ma, Zhong-Zheng;Chen, Jin-Cui;Song, Wei;Wei, Shu-Jun;Yang, Fangyuan;Nguyen, Petr
关键词：
-
Analysis of stomatal characteristics of maize hybrids and their parental inbred lines during critical reproductive periods
作者：Zhang, Changyu;Jin, Yu;Wang, Jinglu;Zhang, Ying;Lu, Xianju;Guo, Xinyu;Zhang, Changyu;Jin, Yu;Wang, Jinglu;Zhang, Ying;Lu, Xianju;Guo, Xinyu;Zhao, Yanxin;Song, Wei
关键词：maize; hybrids; stomatal phenotypes; high-throughput acquisition; deep learning
-
Regulatory networks of mRNAs and miRNAs involved in the immune response of diamondback moth, Plutella xylostella to fungal infection
作者：Xie, Mei-Qiong;Xiao, Hua-Mei;Wang, Long-Jiang;Wei, Shu-Jun
关键词：
Plutella xylostella ;Isaria fumosorosea ; miRNA-mRNA regulatory networks; Immune response -
Genome-wide analysis of PHT gene family and their role in LP and salt stress in sweet potato
作者：Yang, Songtao;Qiao, Shuai;Song, Wei;Tan, Wenfang;Wang, Fang;Wang, Hongyang;Liu, Mengyuan
关键词：Phosphate uptake; Function research; Low phosphate stress; Transcriptome analysis; PHT1-PHT5
-
Genomes of Two Monophagous Weevils and Their Host Plant Provide Insights Into Evolution of Plant Defence and Insect Counter-Defence
作者：Song, Wei;Guo, Wen-Juan;Li, Hui-Juan;Sun, Xue-Wen;Wen, Jun-Bao;Song, Wei;Cao, Li-Jun;Chen, Jin-Cui;Wei, Shu-Jun;Hoffmann, Ary Anthony
关键词：adaptation; coevolution; gene expansion; genome; insect-plant interaction
-
Monitoring invertebrate pests on cowpea crops across China using eDNA metabarcoding
作者：Chen, Qi;Lv, Jun-Xian;Huang, Guo-Hua;Chen, Qi;Lv, Jun-Xian;Huang, Guo-Hua;Xie, Wen;Xie, Wen;Wang, Xing;Wei, Shu-Jun
关键词：environmental DNA; metabarcoding; biodiversity monitoring; cowpea; pest management
-
Chromosome-level genome assembly of the longhorn beetle Arhopalus rusticus (Coleoptera: Cerambycidae)
作者：Gao, Yong-Fu;Song, Wei;Wang, Jia-Xu;Zong, Shi-Xiang;Gao, Yong-Fu;Chen, Jin-Cui;Song, Wei;Wang, Jia-Xu;Wei, Shu-Jun;Yang, Fangyuan;Wang, Jia-Xu
关键词：
