The complete mitochondrial genome of Neopagetopsis ionah (Channichthyidae, neopagetopsis) with phylogenetic consideration
文献类型： 外文期刊
作者： Sang, Chengde 1 ; Liang, Shuzhang 2 ; Song, Wei 2 ; Huang, Hongliang 2 ; Jiang, Keji 2 ; Chen, Xuezhong 2 ;
作者机构： 1.Yantai Univ, Sch Ocean, Yantai, Shangdong, Peoples R China
2.Chinese Acad Fishery Sci, Key Lab Ocean & Polar Fisheries, Minist Agr, East China Sea Fisheries Res Inst, Shanghai 200090, Peoples R China
3.Shanghai Ocean Univ, Coll Fisheries & Life Sci, Shanghai, Peoples R China
关键词： Neopagetopsis ionah; mito-genome; genome structure; phylogenetic tree
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN： 2380-2359
年卷期： 2018 年 3 卷 2 期
页码：
收录情况： SCI
摘要： In this study, the complete mitochondrial genome of Neopagetopsis ionah was obtained, which was 17,634bp including two ribosomal RNAs, 13 protein-coding genes, 22 transfer RNAs, and a non-coding control region. In 13 protein-coding genes, there types of initiation codon (ATC, ATG, and GTG) and four types of stop codons (TAA, TAG, TA, and T) were identified. Among the 22 transfer RNAs, eight tRNAs were encoded by L-strand. The length of D-loop was 1519bp and its contents of A, T, C, and G were 26.9%, 27.6%, 17.5%, and 30%, respectively. The complete mtDNA sequences of N. ionah and other 13 species were used to reconstruct the phylogenetic tree suggested that N. ionah was closest to some species of Channichthyidae. The study would provide a basic data for further research on population structure, conservation genetics and molecular evolution of N. ionah.
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