Complete chloroplast genome of Anemoclema glaucifolium (Ranunculaceae), a vulnerable and threatened species endemic to the Hengduan Mountains
文献类型： 外文期刊
作者： Jiang, Nan 1 ; Zhou, Zhuang 2 ; Yang, Jun-Bo 3 ; Yu, Wen-Bin 1 ;
作者机构： 1.Xishuangbanna Trop Bot Garden, Ctr Integrat Conservat, Mengla 666303, Yunnan, Peoples R China
2.Zhejiang Acad Agr Sci, Zhejiang Inst Subtrop Crops, Wenzhou 325005, Zhejiang, Peoples R China
3.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China
4.Chinese Acad Sci, Southeast Asia Biodivers Res Inst, Nay Pyi Taw 05282, Myanmar
关键词： Anemoclema glaucifolium; Tribe Anenomeae; Chloroplast genome; Ranunculaceae; Genome rearrangement; Clematis
期刊名称：CONSERVATION GENETICS RESOURCES （ 影响因子：0.973； 五年影响因子：0.946 ）
ISSN： 1877-7252
年卷期： 2018 年 10 卷 4 期
页码：
收录情况： SCI
摘要： Anemoclema glaucifolium is a vulnerable and threatened species endemic to the Hengduan Mountains. In this study, we reported a complete plastome of A. glaucifolium, which was de novo assembled using Next-generation Sequencing data. The plastome of A. glaucifolium was quadripartite and 160,400 bp in size, including two inverted repeats (31,256 bp for each) that separate one large single copy (80,251 bp) and one small single copy (17,637 bp) regions. The plastome contained 113 unique genes (with 80 protein-coding, 4 ribosomal RNA and 29 tRNA genes), and 24 entire genes, and partial rps12 (799 bp), rps36 (3 bp) and ycf1 (1097 bp) duplicated in the IR regions. The trnT-UGU tRNA was lost in A. glaucifolium. A maximum likelihood tree using the plastome data recovered A. glaucifolium sister to Clematis spp.
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