Combined Analyses of Chloroplast DNA Haplotypes and Microsatellite Markers Reveal New Insights Into the Origin and Dissemination Route of Cultivated Pears Native to East Asia
文献类型: 外文期刊
作者: Yue, Xiaoyan 1 ; Zheng, Xiaoyan 4 ; Zong, Yu 1 ; Jiang, Shuang 1 ; Hu, Chunyun 1 ; Yu, Peiyuan 1 ; Liu, Guoqin 5 ; Cao, Y 1 ;
作者机构: 1.Zhejiang Univ, Dept Hort, Hangzhou 310028, Zhejiang, Peoples R China
2.Minist Agr China, Key Lab Hort Plant Growth Dev & Qual Improvement, Hangzhou, Zhejiang, Peoples R China
3.Zhejiang Prov Key Lab Integrat Biol Hort Plants, Hangzhou, Zhejiang, Peoples R China
4.Lishui Univ, Coll Ecol, Lishui, Peoples R China
5.Guizhou Univ, Coll Agr, Guiyang, Guizhou, Peoples R China
6.Chinese Acad Agr Sci, Res Inst Pomol, Xingcheng, Peoples R China
7.Hubei Acad Agr Sci, Inst Fruit & Tea, Wuhan, Hubei, Peoples R China
关键词: genetic variation; origin; dissemination route; microsatellite; chloroplast DNA; Asian pear
期刊名称:FRONTIERS IN PLANT SCIENCE ( 影响因子:5.753; 五年影响因子:6.612 )
ISSN: 1664-462X
年卷期: 2018 年 9 卷
页码:
收录情况: SCI
摘要: Asian pear plays an important role in the world pear industry, accounting for over 70% of world total production volume. Commercial Asian pear production relies on four major pear cultivar groups, Japanese pear (JP), Chinese white pear (CWP), Chinese sand pear (CSP), and Ussurian pear (UP), but their origins remain controversial. We estimated the genetic diversity levels and structures in a large sample of existing local cultivars to investigate the origins of Asian pears using twenty-five genome-covering nuclear microsatellite (simple sequence repeats, nSSR) markers and two non-coding chloroplast DNA (cpDNA) regions (trnL-trnF and accD-psaI). High levels of genetic diversity were detected for both nSSRs (H-E = 0.744) and cpDNAs (Hd = 0.792). The major variation was found within geographic populations of cultivated pear groups, demonstrating a close relationship among cultivar groups. CSPs showed a greater genetic diversity than CWPs and JPs, and lowest levels of genetic differentiation were detected among them. Phylogeographical analyses indicated that the CSP, CWP, and JP were derived from the same progenitor of Pyrus pyrifolia in China. A dissemination route of cultivated P. pyrifolia estimated by approximate Bayesian computation suggested that cultivated P. pyrifolia from the Middle Yangtze River Valley area contributed the major genetic resources to the cultivars, excluding those of southwestern China. Three major genetic groups of cultivated Pyrus pyrifolia were revealed using nSSRs and a Bayesian statistical inference: (a) JPs; (b) cultivars from South-Central China northward to northeastern China, covering the main pear production area in China; (c) cultivars from southwestern China to southeastern China, including Yunnan, Guizhou, Guangdong, Guangxi, and Fujian Provinces. This reflected the synergistic effects of ecogeographical factors and human selection during cultivar spread and improvement. The analyses indicated that UP cultivars might be originated from the interspecific hybridization of wild Pyrus ussuriensis with cultivated Pyrus pyrifolia. The combination of uniparental DNA sequences and nuclear markers give us a better understanding of origins and genetic relationships for Asian pear groups and will be beneficial for the future improvement of Asian pear cultivars.
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