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Genome-wide identification of genes involved in carbon fixation in Saccharina japonica and responses of putative C-4-related genes to bicarbonate concentration and light intensity

文献类型： 外文期刊

作者： Shao, Zhanru 1 ; Wang, Wenli 4 ; Zhang, Pengyan 1 ; Yao, Jianting 1 ; Wang, Fahe 4 ; Duan, Delin 1 ;

作者机构： 1.Chinese Acad Sci, CAS Key Lab Expt Marine Biol, Inst Oceanol, 7 Nanhai Rd, Qingdao 266071, Peoples R China

2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, 1 Waded Roa, Qingdao 266237, Peoples R China

3.Chinese Acad Sci, Ctr Ocean Mega Sci, 7 Nanhai Rd, Qingdao 266071, Peoples R China

4.Qingdao Brightmoon Seaweed Grow Co Ltd, State Key Lab Bioact Seaweed Subst, 777 Mingyue Rd, Qingdao 266400, Peoples R China

5.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, 106 Nanjing Rood, Qingdao 266071, Peoples R China

关键词： Carbon fixation; Environmental influences; Enzymatic activity; mRNA abundance; Saccharina japonica

期刊名称：PLANT PHYSIOLOGY AND BIOCHEMISTRY （ 影响因子：4.27； 五年影响因子：4.816 ）

ISSN： 0981-9428

年卷期： 2019 年 137 卷

页码：

收录情况： SCI

摘要： Brown algae play a dominant role hi the primary productivity of coastal ecosystems and may have an efficient carbon fixation. In this work, 56 genes involved in Inorganic carbon fixation were identified from the Saccharine japonica genome. Sequence structure analysis of these genes showed the existence of corresponding function domains and active amino acid sites highly conserved with other stramenopile species. The predicted subcellular localizations showed that Calvin cycle-related enzymes predominantly reside in the plastid and that putative C-4-related enzymes are mainly distributed in the mitochondrion. We determined the transcriptional profiles and enzymatic activities of these C-4-related enzymes in response to the KHCO3 concentrations and light intensities. Pyruvate orthophosphate dikinase (PPDK) presented the greatest response to low HCO3- concentrations and high light intensity. Phosphoenolpyruvate carboxykinase (PEPCK) was up-regulated at low HCO3- concentrations to compensate for ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) and might be the crucial decarboxylase in this kelp. We propose that S. japonica might possess a PPDK- and PEPCK-dependent C-4-like pathway that enables its rapid growth in natural coastal environments.

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