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Isolation and genetic analysis of a nidovirus from crucian carp (Carassius auratus)

文献类型: 外文期刊

作者: Chen Xiao-yu 1 ; Zhou Yong 3 ; Chen Xin 2 ; Zheng Jian 2 ; Zeng Xian-dong 2 ; Ji Feng 1 ; Xu Li-ming 1 ;

作者机构: 1.Chinese Acad Fishery Sci, Heilongjiang River Fishery Res Inst, Harbin 150070, Heilongjiang, Peoples R China

2.Wuhan Customs Dist PR China, Wuhan 430050, Hubei, Peoples R China

3.Chinese Acad Fishery Sci, Yangzi River Fishery Res Inst, Wuhan 430071, Hubei, Peoples R China

期刊名称:ARCHIVES OF VIROLOGY ( 影响因子:2.574; 五年影响因子:2.466 )

ISSN: 0304-8608

年卷期: 2019 年 164 卷 6 期

页码:

收录情况: SCI

摘要: A nidovirus was isolated from crucian carp (Carassius auratus). The complete genome of the crucian carp nidovirus (CCNV) is 25,971 nt long and has five open reading frames, encoding the polyprotein 1ab (pp1ab), spike glycoprotein (S), membrane protein (M), and nucleocapsid protein (N). CCNV has the highest similarity to Chinook salmon nidovirus (CSNV). However, the CCNV HB93 pp1ab protein sequence has three long fragment deletions compared with the CSNV. Phylogenetic analysis based on the complete genome sequence showed that CCNV HB93 clusters with CSNV, indicating that CCNV represents a second species in the new genus Oncotshavirus within the new family Tobaniviridae in the order Nidovirales.

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