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Identification of transgenic crops by CRISPR/Cas12a-assisted magnetic surface-enhanced resonance Raman spectroscopy

文献类型： 外文期刊

作者： Su, Ailing 1 ; Chen, Ziqi 2 ; Wang, Huimin 1 ; Xu, Weiqing 1 ; Chang, Jingjing 3 ; Liang, Chongyang 4 ; Liu, Xiangguo 2 ; Xu, Shuping 1 ;

作者机构： 1.Jilin Univ, Coll Chem, State Key Lab Supramol Struct & Mat, Changchun 130012, Peoples R China

2.Jilin Acad Agr Sci, Inst Agr Biotechnol, Changchun 130033, Peoples R China

3.Changchun Univ Sci & Technol, Sch Chem & Environm Engn, Changchun 130022, Peoples R China

4.Jilin Univ, Inst Frontier Med Sci, Changchun 130021, Peoples R China

5.Jilin Univ, Inst Theoret Chem, Coll Chem, Changchun 130012, Peoples R China

6.Jilin Univ, Coll Chem, Ctr Supramol Chem Biol, Changchun 130012, Peoples R China

关键词： CRISPR/Cas12a; SERRS; Double -stranded DNA; Gene detection; Magnetic-SERS

期刊名称：SENSORS AND ACTUATORS B-CHEMICAL （ 2022影响因子：8.4； 五年影响因子：7.2 ）

ISSN：

年卷期： 2024 年 405 卷

页码：

收录情况： SCI

摘要： Rapid and reliable identification of genetically modified (GM) and non-GM crops is in urgent demand and remains a significant challenge in food safety. Here, a new and reliable Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-mediated magnetic surface-enhanced resonance Raman scattering (SERRS) biosensing is reported to identify specific gene sequences of transgenic crops (CaMV 35 S promoter and Nos terminator). This assay mainly combines the gene-specific recognition ability of CRISPR, the ultra-high sensitivity due to the Raman resonance effect, and the simple separation property of magnetic nanomaterials. A multifunctional SERRS-active nanoprobe was designed by decorating a gold-coated magnetic bead with the Gtriplet deoxyribonucleic acid (DNA) sequences that enable a high loading of Raman reporters (methylene blue) inserted in G-triplet DNAs. The assay is achieved by the recognition of the CRISPR/Cas12a protein for bound target DNAs and the activation of the unlimited trans-cleavage action on the G-triplet DNAs, which causes a release of methylene blue above the nanoprobes and a reduction of the SERRS signal. Gel electrophoresis experiments imply that the designed crRNAs have good recognition and cleavage function for target DNAs and verify the feasibility of the experimental scheme. This SERRS assay exhibits a linear response of 4.15 x 10-12 M to 4.15 x 10-9 M with a pM detection level. Tests of the GM and non-GM crops of actual crop samples have been realized, which implies that this CRISPR-mediated magnetic SERRS method is available for assessing natural samples and working for GM crop regulation.

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