Characterization of a new chlorimuron-ethyl-degrading strain Cedecea sp. LAM2020 and biodegradation pathway revealed by multiomics analysis
文献类型： 外文期刊
作者： Ma, Qingyun 1 ; Han, Xiaoyan 3 ; Song, Jinlong 4 ; Wang, Jie 1 ; Li, Qingqing 1 ; Parales, Rebecca E. 5 ; Li, Lin 2 ; Ruan, Zhiyong 1 ;
作者机构： 1.Chinese Acad Agr Sci, Inst Agr Resources & Reg Planning, CAAS CIAT Joint Lab Adv Technol Sustainable Agr, Beijing 100081, Peoples R China
2.Huazhong Agr Univ, State Key Lab Agr Microbiol, Wuhan 430070, Hubei, Peoples R China
3.Autobio Diagnost Co Ltd, Beijing 450016, Peoples R China
4.Chinese Acad Fishery Sci, Beijing 100081, Peoples R China
5.Univ Calif, Coll Biol Sci, Dept Microbiol & Mol Genet, Davis, CA USA
6.Tibet Agr & Animal Husbandry Univ, Coll Resources & Environm, Linzhi 860000, Peoples R China
7.Yantai Univ, Coll Life Sci, Yantai 264005, Peoples R China
关键词： Chlorimuron-ethyl; Biodegradation products; Transcriptomic analysis; Metabolic response; Cedecea sp
期刊名称：JOURNAL OF HAZARDOUS MATERIALS （ 影响因子：13.6； 五年影响因子：12.7 ）
ISSN： 0304-3894
年卷期： 2023 年 443 卷
页码：
收录情况： SCI
摘要： The widespread use of the herbicide chlorimuron-methyl is hazard to rotational crops and causes soil degra-dation problems. Biodegradation is considered a promising way for removing herbicide residues from the environment. Here, a new isolated strain, Cedecea sp. LAM2020, enabled complete degradation of 100 mg/L chlorimuron-methyl within five days. Transcriptome analysis revealed that ABC transporters, atrazine degra-dation and purine metabolism were enriched in the KEGG pathway. Integrating GO and KEGG classification with related reports, we predict that carboxylesterases are involved in the biodegradation of chlorimuron-methyl by LAM2020. Heterologous expression of the carboxylesterase gene carH showed 26.67% degradation of 50 mg/L chlorimuron-methyl within 6 h. The intracellular potential biological response and extracellular degradation process of chlorimuron-ethyl were analyzed by the nontarget metabolomic and mass spectrometry respectively, and the biodegradation characteristics and complete mineralization pathway was revealed. The cleavage of the sulfonylurea bridge and the ester bond achieved the first step in the degradation of chlorimuron-methyl. Together, these results reveal the presence of acidolysis and enzymatic degradation of chlorimuron-methyl by strain LAM2020. Hydroponic corn experiment showed that the addition of strain LAM2020 alleviated the toxic effects of chlorimuron-ethyl on the plants. Collectively, strain LAM2020 may be a promising microbial agent for plants chlorimuron-ethyl detoxification and soil biofertilizer.
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