Integrated Metabolome and Transcriptome during Fruit Development Reveal Metabolic Differences and Molecular Basis between Lycium barbarum and Lycium ruthenicum
文献类型: 外文期刊
作者: Xie, Ziyang 1 ; Luo, Yu 1 ; Zhang, Changjian 1 ; An, Wei 3 ; Zhou, Jun 4 ; Jin, Cheng 1 ; Zhang, Yuanyuan 1 ; Zhao, Jianhua 3 ;
作者机构: 1.Hainan Univ, Hainan Yazhou Bay Seed Lab, Sanya Nanfan Res Inst, Sanya 572025, Peoples R China
2.Hainan Univ, Coll Trop Crops, Haikou 570228, Peoples R China
3.Ningxia Acad Agr & Forestry Sci, Wolfberry Sci Res Inst, Natl Wolfberry Engn Res Ctr, Yinchuan 750002, Peoples R China
4.North Minzu Univ, Coll Biol Sci & Engn, Yinchuan 750021, Peoples R China
关键词: Lycium barbarum; Lycium ruthenicum; metabolome; transcriptome; flavonoids
期刊名称:METABOLITES ( 影响因子:4.1; 五年影响因子:4.5 )
ISSN:
年卷期: 2023 年 13 卷 6 期
页码:
收录情况: SCI
摘要: Wolfberry (Lycium barbarum) is a traditional cash crop in China and is well-known worldwide for its outstanding nutritional and medicinal value. Lycium ruthenicum is a close relative of Lycium barbarum but differs significantly in size, color, flavor and nutritional composition. To date, the metabolic differences between the fruits of the two wolfberry varieties and the genetic basis behind them are unclear. Here, we compared metabolome and transcriptome data of two kinds of wolfberry fruits at five stages of development. Metabolome results show that amino acids, vitamins and flavonoids had the same accumulation pattern in various developmental stages of fruit but that Lycium ruthenicum accumulated more metabolites than Lycium barbarum during the same developmental stage, including L-glutamate, L-proline, L-serine, abscisic acid (ABA), sucrose, thiamine, naringenin and quercetin. Based on the metabolite and gene networks, many key genes that may be involved in the flavonoid synthesis pathway in wolfberry were identified, including PAL, C4H, 4CL, CHS, CHI, F3H, F3'H and FLS. The expression of these genes was significantly higher in Lycium ruthenicum than in Lycium barbarum, indicating that the difference in the expression of these genes was the main reason for the variation in flavonoid accumulation between Lycium barbarum and Lycium ruthenicum. Taken together, our results reveal the genetic basis of the difference in metabolomics between Lycium barbarum and Lycium ruthenicum and provide new insights into the flavonoid synthesis of wolfberry.
- 相关文献
作者其他论文 更多>>
-
Wolfberry genome database: integrated genomic datasets for studying molecular biology
作者:Cao, You-Long;Li, Yan-Long;Fan, Yun-Fang;Luo, Qing;Zhao, Jian-Hua;Yin, Yue;An, Wei;Shi, Zhi-Gang;Cao, You-Long;Li, Yan-Long;Fan, Yun-Fang;Luo, Qing;Zhao, Jian-Hua;Yin, Yue;An, Wei;Shi, Zhi-Gang;Chen, You-Yi;Li, Chung-, I;Lin, Shao-Ting;Tsai, Wen-Chieh;Lin, Shao-Ting;Tsai, Wen-Chieh;Lee, Bing-Ru;Hsieh, Chun-Lin;Wu, Wei-Sheng;Hsiao, Yu-Yun;Tsai, Wen-Chieh;Chow, Chi-Nga;Chang, Wen-Chi;Tsai, Wen-Chieh;Huang, Chun-Lin;Chang, Wei-Hung;Chang, Wei-Hung;Liu, Zhong-Jian;Liu, Zhong-Jian;Liu, Zhong-Jian;Liu, Zhong-Jian;Tsai, Wen-Chieh;Tsai, Wen-Chieh
关键词:wolfberry; Lycium barbarum; wolfberry genome database (WGDB); user-friendly; genomics; transcriptomics
-
Comparative metabolomics combined with genome sequencing provides insights into novel wolfberry-specific metabolites and their formation mechanisms
作者:Long, Qiyuan;Zhang, Changjian;Zhu, Hui;Liu, Shuo;Liu, Yanchen;Zhang, Yuanyuan;Jin, Cheng;Long, Qiyuan;Zhang, Changjian;Zhu, Hui;Zhou, Yutong;Liu, Shuo;Liu, Yanchen;Zhang, Yuanyuan;Jin, Cheng;Ma, Xuemin;An, Wei;Zhao, Jianhua;Zhou, Jun
关键词:metabolome; nutrition; riboflavin; phenyllactate; copy number variation
-
Impact of Different Rates of Nitrogen Supplementation on Soil Physicochemical Properties and Microbial Diversity in Goji Berry
作者:Liang, Xiaojie;Cui, Yanhong;Su, Shuchai;Liang, Xiaojie;An, Wei;Li, Yuekun;Wang, Yajun;Qin, Xiaoya
关键词:Goji berry production; Ningxia; China; differential nitrogen supplementation rates; 16S RNA gene and IT1 & IT2 region sequencing; soil physicochemical properties
-
Metabolite-based genome-wide association studies enable the dissection of the genetic bases of flavonoids, betaine and spermidine in wolfberry (Lycium)
作者:Zhao, Jianhua;An, Wei;Yin, Yue;Duan, Linyuan;Ren, Xiaoyue;Liang, Xiaojie;Wang, Yajun;Wan, Ru;Huang, Ting;Zhang, Bo;Li, Yanlong;Cao, Youlong;Xu, Yuhui;Li, Haoxia;Wang, Bin;Wang, Liping;Wang, Bi;Luo, Jie
关键词:Wolfberry; genome assembly; metabolite-based genome-wide association study; bioactivity metabolites; candidate gene
-
Effects of different nitrogen application rates and picking batches on the nutritional components of Lycium barbarum L. fruits
作者:Liang, Xiaojie;Su, Shuchai;Liang, Xiaojie;An, Wei;Li, Yuekun;Qin, Xiaoya;Zhao, Jianhua
关键词:wolfberry fruits; nitrogen application rate; pick batch; nutrient composition; metabolomics
-
Major quality regulation network of flavonoid synthesis governing the bioactivity of black wolfberry
作者:Du, Youwei;Liu, Yuanyuan;Liu, Guangli;Lu, Yiming;Wang, Shuanghong;Jia, Hongchen;Zhang, Rong;Sun, Guangyu;Du, Youwei;Liu, Yuanyuan;Liu, Guangli;Lu, Yiming;Wang, Shuanghong;Jia, Hongchen;Zhang, Rong;Sun, Guangyu;Ma, Huiya;Gong, Rui;Lan, Yu;Wang, Junru;Ma, Huiya;Zhao, Jianhua;Li, Na
关键词:antioxidant; bioactivity; metabolism regulation; multi-omics; phytochemical
-
New Genes Identified as Modulating Salt Tolerance in Maize Seedlings Using the Combination of Transcriptome Analysis and BSA
作者:Zhu, Yongxing;Ren, Ying;Liu, Ji'an;Liang, Wenguang;Zhang, Yuanyuan;Shen, Fengyuan;Ling, Jiang;Zhang, Chunyi;Zhu, Yongxing;Zhang, Chunyi
关键词:salt-tolerant; BSA-seq; transcriptomic analysis; maize inbred