Identification and molecular characterization of a novel carlavirus infecting rose plants (Rosa chinensis Jacq.)
文献类型： 外文期刊
作者： Xing, Fei 1 ; Gao, Dehang 2 ; Habili, Nuredin 3 ; Wang, Hongqing 1 ; Zhang, Zhixiang 1 ; Cao, Mengji 4 ; Li, Shifang 1 ;
作者机构： 1.Inst Plant Protect, Chinese Acad Agr Sci, State Key Lab Biol Plant Dis & Insect Pests, Beijing 100193, Peoples R China
2.China Agr Univ, Coll Hort, Dept Fruit Sci, Beijing 100193, Peoples R China
3.Australian Wine Res Inst, POB 197, Glen Osmond, SA 5064, Australia
4.Southwest Univ, Natl Citrus Engn Res Ctr, Chongqing 400712, Peoples R China
5.Chinese Acad Trop Agr Sci, Environm & Plant Protect Inst, Haikou 571101, Hainan, Peoples R China
期刊名称：ARCHIVES OF VIROLOGY （ 影响因子：2.574； 五年影响因子：2.466 ）
ISSN： 0304-8608
年卷期： 2021 年 166 卷 12 期
页码：
收录情况： SCI
摘要： In the present study, the genome sequence of a potential novel virus, tentatively named "rose virus C" (RVC), was mined from publically available transcriptomic data from a Rosa chinensis plant. The complete genome sequence of RVC consists of 8,386 nt, excluding a 3 ' poly(A) tail, and contains five ORFs. Phylogenetic analysis showed that RVC clustered with members of the genus Carlavirus, family Betaflexiviridae. The replicase gene had 48.8-52.1% nt sequence identity to those of other carlaviruses, while the CP gene had 40.4-45.9% nt sequence identity, which is far below the species demarcation cutoff of 72%. The incidence of RVC in rose plants was low (5.4%). Overall, our data suggest that RVC is a novel atypical virus of the genus Carlavirus.
- 相关文献
作者其他论文 更多>>
-
First Report of Athelia rolfsii Causing Southern Blight on Basella alba in Malaysia
作者：Khoo, Ying Wei;Li, Shifang;Khoo, Ying Wei;Baadu, Rosina;Chong, Khim Phin;Tan, Hui Teng;Khaw, Yam Sim;Li, Shifang
关键词：Athelia rolfsii; Basella alba; fungi; Malaysia; pathogen detection; sclerotia; vegetables; yield loss and economic impacts
-
The Virome of Piper nigrum: Identification, Genomic Characterization, Prevalence, and Transmission of Three New Viruses of Black Pepper in China
作者：Ma, Yuxin;Che, Haiyan;Lin, Yating;Li, Shifang;Ma, Yuxin;Xing, Fei;Li, Shifang;Gao, Shengfeng
关键词：badnavirus; enamovirus; fabavirus; high-throughput sequencing; novel viruses; Piper nigrum; transmission; viral disease
-
Diverse Novel Viruses Coinfecting the Tropical Ornamental Plant Polyscias balfouriana in China
作者：Ma, Yuxin;Che, Haiyan;Lin, Yating;Li, Shifang;Ma, Yuxin;Gao, Shengfeng;Li, Shifang
关键词：Polyscias balfouriana; virus discovery; coinfection; ornamental plant; Betaflexiviridae; Closteroviridae; Capillovirus; Citrivirus; Crinivirus
-
Breeding of virus-resistant transgenic sugarcane by the integration of the Pac1 gene
作者：Wang, Wenzhi;Wang, Jungang;Feng, Xiaoyan;Shen, Llinbo;Feng, Cuilian;Zhao, Tingting;Zhang, Shuzhen;Wang, Wenzhi;Xiao, Hong;Li, Shifang
关键词：sugarcane; double-stranded RNA-specific ribonuclease; PAC1 gene; broad-spectrum virus-resistant; genetic engineering
-
In-silico primer designing and PCR for detection of monkeypox virus (MPXV)
作者：Khoo, Ying Wei;Li, Shifang;Li, Shifang;Khoo, Ying Wei;Chong, Khim Phin
关键词：Bioinformatics tools; Pandemic; Pathology; Zoonosis
-
Strawberry, a New Natural Host of Brassica Yellows Virus in China
作者：He, Chengyong;Zhao, Xiaoli;Fan, Lingjiao;Wang, Hongqing;He, Chengyong;Li, Shifang;Li, Shifang
关键词：Brassica yellows virus; strawberry; new natural host; first report
-
First Report of Cassytha filiformis parasitizing Justicia gendarussa in Malaysia
作者：Khoo, Ying Wei;Li, Shifang;Li, Shifang;Khoo, Ying Wei;Chong, Khim Phin
关键词：
