Effects of temperature and microwave on the stability of the blast effector complex APikL2A/sHMA25 as determined by molecular dynamics analyses
文献类型： 外文期刊
作者： Zhao, Ling 1 ; Zhang, Ting 1 ; Luo, Yanjie 1 ; Li, Lin 1 ; Cheng, Ruhong 1 ; Shi, Zhigang 1 ; Wang, Genping 1 ; Ren, Tiancong 2 ;
作者机构： 1.Hebei Acad Agr & Forestry Sci, Inst Millet Crops,Key Lab Minor Cereal Crops Hebei, Natl Foxtail Millet Improvement Ctr,Minist Agr & R, Key Lab Genet Improvement & Utilizat Featured Coar, Shijiazhuang 050035, Peoples R China
2.Shijiazhuang Univ, Sch Resources & Environm Sci, Shijiazhuang 050035, Peoples R China
关键词： Blast effector; Molecular dynamic simulations; Temperature; Oscillating electric field
期刊名称：JOURNAL OF MOLECULAR MODELING （ 影响因子：2.2； 五年影响因子：1.8 ）
ISSN： 1610-2940
年卷期： 2023 年 29 卷 5 期
页码：
收录情况： SCI
摘要： Magnaporthe oryzae is the causal agent of rice blast, and understanding how abiotic stress affects the resistance of plants to this disease is useful for designing disease control strategies. In this paper, the effects of temperature and microwave irradiation on the effector complex comprising APikL2A from M. oryzae and sHMA25 from foxtail millet were investigated by molecular dynamics simulations using the GROMACS software package. While the structure of APikL2A/sHMA25 remained relatively stable in a temperature range of 290 K (16.85 degrees C) to 320 K (46.85 degrees C), the concave shape of the temperature-dependent binding free energy curve indicated that there was maximum binding affinity between APikL2A and sHMA25 at 300 K-310 K. This coincided with the optimum infectivity temperature, thus suggesting that coupling of the two polypeptides may play a role in the infection process. A strong oscillating electric field destroyed the structure of APikL2A/sHMA25, although it was stable and not susceptible to weak electric fields.
- 相关文献
作者其他论文 更多>>
-
Utilizing machine learning and bioinformatics analysis to identify drought-responsive genes affecting yield in foxtail millet
作者：Zhu, Chunhui;Niu, Xingfang;Wang, Litao;Zhao, Ling;Zhao, Shaoxing;Li, Lin;Liu, Jiaxin;Zhang, Ting;Cheng, Ruhong;Shi, Zhigang;Zhang, Haoshan;Wang, Genping;Niu, Xingfang;Wang, Litao;Gao, Hui;Liu, Jiaxin
关键词：Drought stress; Haplotype; Machine learning; Foxtail millet
-
Development of a Csy4-Processing TRV-Based CRISPR/Cas9 Genome Editing System in Nicotiana benthamiana
作者：Luo, Yanjie;Na, Ren;Tang, Xiaodong;Yu, Cuihong;Na, Ren;Qiu, Yang;Nowak, Julia S.;Lu, Qing Shi;Tian, Lining;Luo, Yanjie
关键词：CRISPR/Cas9; Csy4 nuclease; Genome editing; Viral vector; TRV
-
Haplotype variation and KASP markers for SiPSY1 - A key gene controlling yellow kernel pigmentation in foxtail millet
作者：Zuo, Rongjun;Zhang, Yanyan;Wang, Chunfang;Zhi, Hui;Zhang, Linlin;Tang, Sha;Jia, Guanqing;Diao, Xianmin;Yang, Yanbing;Guan, Yanan;Li, Shunguo;Cheng, Ruhong;Diao, Xianmin;Zuo, Rongjun;Wang, Chunfang;Shang, Zhonglin;Diao, Xianmin
关键词：Carotenoids; Lutein; Zeaxanthin; Marker assisted selection; Setaria italica
-
Molecular evolution, diversification, and expression assessment of MADS gene family in Setaria italica, Setaria viridis, and Panicum virgatum
作者：Gao, Hui;Suo, Xiaoman;Ma, Xinlei;Gao, Hui;Zhao, Ling;Cheng, Ruhong;Wang, Genping;Zhang, Haoshan;Zhang, Haoshan
关键词：MADS gene family; Molecular evolution; Drought stress; Setaria; Panicum virgatum
-
Proteomic analysis of leaves and roots during drought stress and recovery in Setaria italica L.
作者：Gao, Hui;Li, Jingshi;Shen, Jiangjie;Lin, Xiaohu;Gao, Hui;Zhang, Ting;Zhao, Ling;Zhang, Haoshan;Wang, Genping;Ge, Weina;Bai, Lin;Bai, Lin;Xu, Ningwei
关键词：drought stress; leaf; root; proteomic; Setaria italica L
-
Structural, functional and mechanistic insights uncover the role of starch in foxtail millet cultivars with different congee-making quality
作者：Zhang, Xinyu;Shen, Qun;Yang, Yu;Zhang, Fan;Wang, Chao;Liu, Zhenyu;Zhao, Qingyu;Zhang, Xinyu;Shen, Qun;Yang, Yu;Zhang, Fan;Wang, Chao;Liu, Zhenyu;Zhao, Qingyu;Zhang, Xinyu;Shen, Qun;Yang, Yu;Zhang, Fan;Wang, Chao;Liu, Zhenyu;Zhao, Qingyu;Wang, Xianrui;Diao, Xianmin;Cheng, Ruhong
关键词：Foxtail millet starch structure; Starch functional properties; Eating quality
-
Exploring the SiCCT Gene Family and Its Role in Heading Date in Foxtail Millet
作者：Li, Congcong;Ma, Jian;Wang, Hailong;Wang, Guoliang;Liu, Guiming;Wei, Jianhua;Yao, Lei;Li, Congcong;Wang, Hailong;Wang, Guoliang;Liu, Guiming;Wei, Jianhua;Yao, Lei;Li, Congcong;Wang, Huan;Ma, Jian;Wang, Genping;Li, Haiquan;Jiang, Yanmiao;Liu, Yanan;Liu, Guoqing;Cheng, Ruhong
关键词：gene duplication; transcriptional factor; CCT gene family; heading date; SiPRR37; foxtail millet
