High-resolution genome-wide association study reveals two genes influencing dietary fiber content in sesame (Sesamum indicum L.)
文献类型: 外文期刊
作者: Li, Guiting 1 ; Cao, Hengchun 1 ; Yang, Weifei 1 ; Ju, Ming 1 ; Ma, Qin 1 ; Wang, Cuiying 1 ; Zhang, Zhanyou 1 ; Tian, Qiuzhen 1 ; Chen, Jiayuan 1 ; Yuan, Qingli 1 ; Du, Hua 1 ; Miao, Hongmei 1 ; Zhang, Haiyang 1 ;
作者机构: 1.Henan Acad Agr Sci, Henan Sesame Res Ctr, Zhengzhou 450002, Peoples R China
2.Henan Acad Agr Sci, Henan Sesame Res Ctr, Henan Key Lab Specif Oilseed Crops Genom, Zhengzhou, Peoples R China
期刊名称:CROP SCIENCE ( 影响因子:1.9; 五年影响因子:2.3 )
ISSN: 0011-183X
年卷期: 2025 年 65 卷 1 期
页码:
收录情况: SCI
摘要: Dietary fiber is widely recognized for its beneficial effects on human health, and sesame (Sesamum indicum L.) seeds are an important source of dietary fiber. However, efforts to improve sesame for higher fiber have been constrained by limited knowledge of the genetic factors underlying this trait. In this study, we identified a strong correlation between fiber and sugar content, both of which are significantly influenced by genetic factors. A large-scale analysis of 222 sesame germplasm resources revealed genome-wide single nucleotide polymorphism (n = 1,535,018), insertions and deletions (InDels; n = 325,371), and structure variations (SVs; n = 29,028). Linkage disequilibrium and genome-wide association studies identified an InDel quantitative trait locus targeting the SiLAC3 gene, which caused a gene frameshift mutation significantly associated with both sugar and dietary fiber traits. Furthermore, a 1201-bp deletion SV in the coding and 3 ' untranslated regions of the SiXTH30 gene was associated with high fiber content. Notably, two accessions (CX150 and CX546) with pyramiding favorable alleles of these two mutated genes exhibited a significant increase in fiber content compared to accessions with only one favorable allele. We also found two candidate genes highly expressed during the early and middle stages of seed development, both of which have been previously reported to play important roles in cell wall fiber content. In conclusion, our findings highlight two key fiber-associated candidate genes, which could serve as valuable resources for molecular breeding aimed at increasing fiber content in sesame seeds.
- 相关文献
作者其他论文 更多>>
-
The candidate gene SibHLHA regulates anthocyanin-driven purple pigmentation in Sesamum indicum flowers
作者:Zhao, Fengli;Cui, Chengqi;Wei, Wenxing;Du, Zhenwei;Wu, Ke;Jiang, Xiaolin;Zheng, Yongzhan;Liu, Yanyang;Mei, Hongxian;Zhang, Haiyang;Zhao, Fengli;Cui, Chengqi;Du, Zhenwei;Wu, Ke;Jiang, Xiaolin;Liu, Yanyang;Mei, Hongxian;Zhang, Haiyang
关键词:
-
Fine mapping and functional characterization of SiLAC3 in regulating brown seed coat pigmentation, integrated transcriptomic and metabolomic analyses in sesame (Sesamum indicum L.)
作者:Wang, Han;Cui, Chengqi;Wang, Jingjing;Du, Zhenwei;Wu, Ke;Jiang, Xiaolin;Zheng, Yongzhan;Zhao, Fengli;Liu, Yanyang;Mei, Hongxian;Zhang, Haiyang;Cui, Chengqi;Wang, Jingjing;Du, Zhenwei;Wu, Ke;Jiang, Xiaolin;Zheng, Yongzhan;Zhao, Fengli;Liu, Yanyang;Mei, Hongxian;Zhang, Haiyang;Wang, Han;Jing, Bing
关键词:Sesame; Recombinants analysis; Laccase; Lignin biosynthesis; Brown seed coat
-
Genome-Wide Identification and Expression Profiling of Phosphatidylethanolamine-Binding Protein (PEBP) Genes in Helianthus annuus L.
作者:Sun, Yiyi;Wang, Yanwen;Bai, Jingyan;Guo, Jiatong;Liu, Lingyun;Li, Guiting;Tian, Qiuzhen;Lv, Shuping;Cao, Hengchun;Yang, Xiaojie;Li, Guiting;Tian, Qiuzhen;Cao, Hengchun;Li, Guiting;Tian, Qiuzhen;Cao, Hengchun;Lv, Shuping;Yang, Xiaojie
关键词:expression profiles; gene duplication and evolution; PEBP gene family; phylogenetic analysis; sunflower
-
Physiological and Transcriptional Responses of Sesame (Sesamum indicum L.) to Waterlogging Stress
作者:Fan, Yadong;Cui, Chengqi;Liu, Yanyang;Wu, Ke;Du, Zhenwei;Jiang, Xiaolin;Zhao, Fengli;Zhang, Ruping;Wang, Jingjing;Mei, Hongxian;Zhang, Haiyang;Fan, Yadong;Cui, Chengqi;Liu, Yanyang;Wu, Ke;Du, Zhenwei;Jiang, Xiaolin;Zhao, Fengli;Zhang, Ruping;Wang, Jingjing;Mei, Hongxian;Zhang, Haiyang
关键词:sesame; waterlogging; transcriptome
-
Identification of Fusarium wilt resistance gene SiRLK1 in Sesamum indicum L.
作者:Duan, Yinghui;Qu, Wenwen;Chang, Shuxian;Ju, Ming;Wang, Cuiying;Mu, Cong;Cao, Hengchun;Li, Guiting;Tian, Qiuzhen;Ma, Qin;Zhang, Zhanyou;Zhang, Haiyang;Miao, Hongmei;Duan, Yinghui;Qu, Wenwen;Chang, Shuxian;Ju, Ming;Wang, Cuiying;Mu, Cong;Cao, Hengchun;Li, Guiting;Tian, Qiuzhen;Ma, Qin;Zhang, Zhanyou;Zhang, Haiyang;Miao, Hongmei;Duan, Yinghui;Qu, Wenwen;Chang, Shuxian;Ju, Ming;Wang, Cuiying;Mu, Cong;Cao, Hengchun;Li, Guiting;Tian, Qiuzhen;Ma, Qin;Zhang, Zhanyou;Zhang, Haiyang;Miao, Hongmei
关键词:Breeding for resistance; Genetic analysis; Molecular analysis; Tandem kinase domain
-
Deletion of a 1,049 bp sequence from the 5
UTR upstream of the SiHEC3 gene induces a seed non-shattering mutation in sesame 作者:Ju, Ming;Li, Guiting;Tian, Qiuzhen;Cao, Hengchun;Ma, Qin;Duan, Yinghui;Guo, Hui;Zhang, Zhanyou;Huang, Yingying;Wang, Huili;Zhang, Haiyang;Miao, Hongmei;Ju, Ming;Li, Guiting;Tian, Qiuzhen;Cao, Hengchun;Ma, Qin;Duan, Yinghui;Guo, Hui;Zhang, Zhanyou;Huang, Yingying;Wang, Huili;Zhang, Haiyang;Miao, Hongmei;Ju, Ming;Li, Guiting;Tian, Qiuzhen;Cao, Hengchun;Ma, Qin;Duan, Yinghui;Guo, Hui;Zhang, Zhanyou;Huang, Yingying;Wang, Huili;Zhang, Haiyang;Miao, Hongmei
关键词:sesame ( Sesamum indicum L.); association mapping; seed shattering; structure variation; bHLH transcription factor
-
Transcriptome Analysis of Sesame (Sesamum indicum L.) Reveals the LncRNA and mRNA Regulatory Network Responding to Low Nitrogen Stress
作者:Zhang, Pengyu;Li, Feng;Tian, Yuan;Wang, Dongyong;Fu, Jinzhou;Rong, Yasi;Wu, Yin;Gao, Tongmei;Zhang, Haiyang;Zhang, Pengyu;Li, Feng;Tian, Yuan;Wang, Dongyong;Fu, Jinzhou;Rong, Yasi;Gao, Tongmei;Zhang, Haiyang
关键词:sesame; low nitrogen stress; transcriptome analysis; regulatory network



