Genome Sequence of Rhizoctonia solani Anastomosis Group 4 Strain Rhs4ca, a Widespread Pathomycete in Field Crops
文献类型: 外文期刊
作者: Zhang, Zhengkun 1 ; Xia, Xinyao 3 ; Du, Qian 1 ; Xia, Lei 1 ; Ma, Xiaoyu 3 ; Li, Qiyun 1 ; Liu, Wende 3 ;
作者机构: 1.Jilin Acad Agr Sci, Jilin Key Lab Agr Microbiol, Changchun 130033, Jilin, Peoples R China
2.Minist Agr, Key Lab Integrated Pest Management Crops Northeas, Changchun 130033, Jilin, Peoples R China
3.Chinese Acad Agr Sci, Inst Plant Protect, State Key Lab Biol Plant Dis & Insect Pests, Beijing 100193, Peoples R China
关键词: genome; PacBio; Rhizoctonia solani AG4
期刊名称:MOLECULAR PLANT-MICROBE INTERACTIONS ( 影响因子:4.171; 五年影响因子:4.836 )
ISSN: 0894-0282
年卷期: 2021 年 34 卷 7 期
页码:
收录情况: SCI
摘要: Rhizoctonia solani is an important soil-borne fungal pathogen that causes serious diseases on many agricultural crops and vegetables. Here, we report a complete genome assembly of R. solani AG4 (assembly: 45.47 Mb; contig N-50: 1.56 Mb), using a combination of Illumina paired-end and PacBio long-read sequencing data. A total of 267 noncoding RNAs and 11,592 genes were predicted, including 109 genes associated with carbohydrate-active enzymes and 2,488 genes involved in host-pathogen interactions. The complete genome of R. solani AG4 represents a valuable base for studying interactions between host plants and pathogenic fungi and to search for potential antimicrobial targets.
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