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Genome-wide identification of Aux/IAA and ARF gene families reveal their potential roles in flower opening of Dendrobium officinale

文献类型： 外文期刊

作者： Si, Can 1 ; Zeng, Danqi 1 ; da Silva, Jaime A. Teixeira 1 ; Qiu, Shengxiang 1 ; Duan, Jun 1 ; Bai, Song 4 ; He, Chunmei 1 ;

作者机构： 1.Chinese Acad Sci, Key Lab South China Agr Plant Mol Anal & Genet Imp, Guangdong Prov Key Lab Appl Bot, South China Bot Garden, Guangzhou 510650, Peoples R China

2.South China Natl Bot Garden, Guangzhou 510650, Peoples R China

3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China

4.Guangdong Acad Agr Sci, Rice Res Inst, Guangzhou 510640, Peoples R China

5.Guangdong Key Lab New Technol Rice Breeding & Guan, Guangzhou, Peoples R China

关键词： Dendrobium officinale; Aux; IAA genes; ARF genes; Cis-regulatory element; Flower development

期刊名称：BMC GENOMICS （ 影响因子：4.4； 五年影响因子：4.7 ）

ISSN： 1471-2164

年卷期： 2023 年 24 卷 1 期

页码：

收录情况： SCI

摘要： BackgroundThe auxin indole-3-acetic acid (IAA) is a vital phytohormone that influences plant growth and development. Our previous work showed that IAA content decreased during flower development in the medicinally important orchid Dendrobium officinale, while Aux/IAA genes were downregulated. However, little information about auxin-responsive genes and their roles in D. officinale flower development exists.ResultsThis study validated 14 DoIAA and 26 DoARF early auxin-responsive genes in the D. officinale genome. A phylogenetic analysis classified the DoIAA genes into two subgroups. An analysis of cis-regulatory elements indicated that they were related by phytohormones and abiotic stresses. Gene expression profiles were tissue-specific. Most DoIAA genes (except for DoIAA7) were sensitive to IAA (10 mu mol/L) and were downregulated during flower development. Four DoIAA proteins (DoIAA1, DoIAA6, DoIAA10 and DoIAA13) were mainly localized in the nucleus. A yeast two-hybrid assay showed that these four DoIAA proteins interacted with three DoARF proteins (DoARF2, DoARF17, DoARF23).ConclusionsThe structure and molecular functions of early auxin-responsive genes in D. officinale were investigated. The DoIAA-DoARF interaction may play an important role in flower development via the auxin signaling pathway.

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