您好,欢迎访问中国水产科学研究院 机构知识库!

Isolation and characteristics of polymorphic microsatellite markers in Pennahia argentatus

文献类型: 外文期刊

作者: Ma, Chunyan 1 ; Ma, Hongyu 1 ; Xu, Zhen 1 ; Ma, Lingbo 1 ; Shen, Anglv 1 ; Feng, Nana 1 ;

作者机构: 1.Chinese Acad Fishery Sci, Key Lab E China Sea & Ocean Fishery Resources Exp, Minist Agr, E China Sea Fisheries Res Inst, Shanghai 200090, Peoples R China

2.Shanghai Ocean Univ, Coll Fisheries & Life Sci, Shanghai 201306, Peoples R China

3.Shanghai Oce

关键词: Pennahia argentatus;Microsatellite markers;Polymorphism;5′ anchored PCR

期刊名称:BIOCHEMICAL SYSTEMATICS AND ECOLOGY ( 影响因子:1.381; 五年影响因子:1.351 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: In this study, we isolated 12 novel polymorphic microsatellite markers in Pennahia argentatus by using the 5' anchored PCR technique. The characteristics of these loci were estimated by using a sample of 30 individuals. A total of 69 alleles were detected with an average of 5.75 alleles per locus. The PIC value for the 12 microsatellite loci ranged from 0.1202 to 0.8466. The observed and expected heterozygosity per locus ranged from 0.1379 to 0.9333 and from 0.1307 to 0.8784, with an average of 0.5997 and 0.6083, respectively. One loci significantly deviated from Hardy-Weinberg equilibrium after Bonferroni correction (P < 0.0042) and no significant linkage disequilibrium between pairs of loci was found. This study will be useful for the analysis of population genetic diversity, and the management of this important fish resource. (C) 2012 Elsevier Ltd. All rights reserved.

  • 相关文献

[1]Development of polymorphic microsatellite markers in Sardinella aurita by 5 '-anchored PCR technique. Ma, Chunyan,Jiang, Wei,Ma, Hongyu,Feng, Chunlei,Zhang, Xun,Ma, Lingbo. 2015

[2]Development and testing of 13 polymorphic microsatellite markers in Larimichthys polyactis (Sciaenidae) using 5 ' anchored PCR. Ma, C. Y.,Ma, H. Y.,Ma, L. B.. 2011

[3]Development and characterization of twelve microsatellite markers for miiuy croaker. Ma, Chunyan,Ma, Hongyu,Ma, Lingbo,Li, Shujuan,Jiang, Wei. 2013

[4]Isolation and characterization of 16 polymorphic microsatellite markers from Nibea albiflora. Ma, Chunyan,Ma, Hongyu,Ma, Lingbo,Jiang, Keji,Cui, Haiyu,Ma, Qunqun,Cui, Haiyu,Ma, Qunqun. 2011

[5]Isolation and characterization of polymorphic microsatellite loci from cDNA library of Scylla paramamosain. Ma, Chunyan,Ma, Hongyu,Ma, Lingbo,Jiang, Keji,Zhang, Fengying,Song, Wei. 2011

[6]Ten polymorphic microsatellite loci for the Atlantic halibut (Hippoglossus hippoglossus) and cross-species application in related species. Ding, Hao,Shao, Changwei,Liao, Xiaolin,Xu, Genbo,Ji, Xiangshan,Chen, Songlin,Ding, Hao.

[7]Cloning of Disease Resistance-relevant Nramp and MHC IIB Genes and their Application Potential in Molecular Breeding for Disease Resistance in Japanese Flounder (Paralichthys olivaceus). S.L. Chen,Y.X. Zhang,Z.J. Wang,Z.X. Sha,M.Y. Xu,Chinese Academy of Fishery Sciences; Chinese Academy of Sciences;. 2005

[8]Development of 15 novel dinucleotide microsatellite markers in the Senegalese sole Solea senegalensis. Chen, Song-Lin,Shao, Chang-Wei,Xu, Gen-Bo,Liao, Xiao-Lin,Tian, Yong-Sheng. 2008

[9]Rapid isolation and characterization of microsatellites from the genome of pearl oyster (Pinctada martensi Dunker). Kuang, Youyi,Tong, Guangxiang,Yan, Xuechun,Sun, Xiaowen. 2009

[10]Isolation and characterization of 31 polymorphic microsatellite markers in barfin flounder (Verasper moseri) and the cross-species amplification in spotted halibut (Verasper variegatus). Ma, Hongyu,Chen, Songlin,Ma, Hongyu. 2009

[11]Polymorphic microsatellite markers in the false kelpfish Sebastiscus marmoratus: isolation, characterization, and cross-species amplification. Liu, H. B.,Liu, H. B.,Liu, S. F.,Ye, J. B.,Yuan, Y. J.,Zhuang, Z. M.,Yuan, Y. J.,Ding, S. X.. 2014

[12]De novo assembly and characterization of the Hucho taimen transcriptome. Tong, Guang-Xiang,Xu, Wei,Zhang, Yong-Quan,Zhang, Qing-Yu,Yin, Jia-Sheng,Kuang, You-Yi. 2018

[13]Development of thirty-four novel polymorphic microsatellite markers in Coilia ectenes (Clupeiformes: Engraulidae) and cross-species amplification in two closely related taxa. Chen, Fang,Zeng, Liyan,Cheng, Qiqun,Chen, Fang. 2012

[14]Development of thirty-five novel polymorphic microsatellite markers in Pseudosciaena polyactis (Perciformes:Sciaenidae) and cross-species amplification in closely related species, Pseudosciaena crocea. Chen, Wenming,Cheng, Qiqun,Chen, Wenming.

[15]Isolation and characterization of eight microsatellite loci of Glyptothorax laosensis in the Lancang river. Jin, Ju,Wang, DengQiang,Liu, MingDian,Yin, ShuangYu,Deng, HuaTang,Liu, ShaoPing.

[16]Isolation and characterization of 30 novel polymorphic microsatellite loci from Japanese halfbeak, Hyporhamphus sajori (Temminck et Schlegel, 1846). Xing, Shi-Chao,Xu, Gen-Bo,Liu, Shan-Shan,Liao, Xiao-Lin,Tian, Yong-sheng,Chen, Song-Lin,Xing, Shi-Chao,Yang, Guan-Pin.

[17]Isolation and characterization of polymorphic microsatellite markers for Eupleurogrammus muticus. Liu, Shufang,Liu, Qi,Dai, Fangqun,Ma, Qian,Zhuang, Zhimeng,Zu, Dangmin.

[18]Isolation and characterization of sixteen microsatellite loci of a blind cavefish, Triplophysa xiangxiensis. Yao, Yanhong,Yu, Lai Ning,Yao, Yanhong,Wang, Deng Qiang,He, Li,Yu, Lai Ning.

[19]Screening of SSR markers associated with scale cover pattern and mapped to a genetic linkage map of common carp (Cyprinus carpio L.). Xiao, Tongqian,Lu, Cuiyun,Xu, Yulan,Li, Chao,Zheng, Xianhu,Cao, Dingchen,Cheng, Lei,Sun, Xiaowen,Xiao, Tongqian,Li, Chao,Mahboob, Shahid.

[20]Inbreeding and genetic diversity analysis in a hatchery release population and clones of Rhopilema esculentum based on microsatellite markers. Tian Tao,Chen Zaizhong,Wang Mosang,Tian Tao,Wang Mosang,Hu Yulong,Wang Weiji,Wang Weiji. 2017

作者其他论文 更多>>