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Genetic differentiation of Oryza ruffipogon Griff. from Hainan Island and Guangdong, China Based on Hd1 and Ehd1 genes

文献类型: 外文期刊

作者: Dong, Yibo 1 ; Pei, Xinwu 1 ; Yuan, Qianhua 2 ; Wang, Feng 3 ; Wu, Hongjin 4 ; Jia, Shirong 1 ; Peng, Yufa 4 ;

作者机构: 1.Chinese Acad Agr Sci, Inst Biotechnol, Beijing 100081, Peoples R China

2.Hainan Univ, MOE Key Lab Trop Biol Resources, Coll Agr Sci, Haikou 570228, Peoples R China

3.Guangdong Acad Agr Sci, Rice Res Inst, Guangzhou 510640, Peoples R China

4.Chinese Acad Agr Sci, Inst Plant Protect, Beijing 100094, Peoples R China

关键词: Oryza rufipogon;Hd1;Ehd1;Phylogeny;Geographic isolation

期刊名称:BIOCHEMICAL SYSTEMATICS AND ECOLOGY ( 影响因子:1.381; 五年影响因子:1.351 )

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年卷期:

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收录情况: SCI

摘要: In this study, we analyze the genetic diversity and phylogeny of photoperiod related genes Hd1 and Ehd1 in Oryza rufipogon populations from Hainan Island and Guangdong province separated by the Qiongzhou Strait. The levels of variations in Hd1 and Ehd1 of O. rufipogon from Hainan Island were higher than those from Guangdong province, although their polymorphism distribution trends were similar. The haplotype phylogenetic analysis showed that the genetic diversity of O. rufipogon from Hainan Island was richer than that from Guangdong province. The phylogenic networks of individuals based on either Hd1 or Ehd1 or the combination of these genes indicated that the differentiation of O. rufipogon did not occur due to geographic isolation. Our findings suggest that different ecological niches seem to have significant impacts on the genetic differentiation of O. rufipogon populations.

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