浙江省农业科学院机构知识库

A study of genetic diversity of colored barley (Hordeum vulgare L.) using SSR markers

收藏
分享
全文链接

文献类型：外文期刊

作者： Hua, Wei ¹ ; Zhang, Xiaoqin ² ; Zhu, Jinghuan ¹ ; Shang, Yi ¹ ; Wang, Junmei ¹ ; Jia, Qiaojun ¹ ; Li, Chengdao ³ ; Yang, ¹ ;

作者机构： 1.Zhejiang Acad Agr Sci, Inst Crop & Nucl Technol Utilizat, Hangzhou 310021, Zhejiang, Peoples R China

2.Hangzhou Normal Univ, Coll Life & Environm Sci, Hangzhou 310021, Zhejiang, Peoples R China

3.Govt Western Australia, Dept Agr & Food, S Perth, WA 6151, Australia

关键词： Colored barley;Genetic diversity;Hordeum vulgare L.;Population structure;SSR marker

期刊名称：GENETIC RESOURCES AND CROP EVOLUTION （影响因子：1.524；五年影响因子：1.713 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Colored barley is used for the development of barley-containing functional food because of the special nutrients present in its grains. Meanwhile, grain color, which is also one of the primary traits selected in crop domestication, can be used as an important indicator of crop evolution and domestication. In this study, 35 SSR marker pairs were used to analyze the genetic diversity of 277 germplasm accessions representing yellow, purple, blue, and black barley. The analysis revealed that rich genetic variation was mainly caused by the genetic diversity of individuals. Differently colored barley populations could be further divided into subpopulations. As per PCoA, AMOVA, and structure analysis, a complex evolutionary relationship existed among the four colored barley populations. This phenomenon may have been the result of long-term multidirectional selection by humans on the basis of barley use. Studies on colored barley provide useful data for future breeding and utilization of these materials.

相关文献

[1]Genetic diversity and population structure of cultivated bromeliad accessions assessed by SRAP markers. Zhang, Fei,Ge, Yaying,Wang, Weiyong,Shen, Xiaolan,Liu, Xiaojing,Liu, Jianxin,Tian, Danqing,Yu, Xinying. 2012

[2]Development of Cymbidium ensifolium genic-SSR markers and their utility in genetic diversity and population structure analysis in cymbidiums. Li, Xiaobai,Jin, Liang,Jin, Feng,Jackson, Aaron,Huang, Cheng,Li, Kehu,Shu, Xiaoli. 2014

[3]Evaluation of the genetic diversity and population structure of five indigenous and one introduced Chinese goose breeds using microsatellite markers. Li, Jinjun,Yuan, Qingyuan,Shen, Junda,Tao, Zhengrong,Li, Guoqing,Tian, Yong,Wang, Deqian,Chen, Li,Lui, Lizhi. 2012

[4]Genetic diversity, population structure, pollen morphology and cross-compatibility among Chinese Cymbidiums. Li, Xiaobai,Xiang, Lin,Wang, Yan,Luo, Jie,Wu, Chao,Sun, Chongbo,Xie, Ming. 2014

[5]Genetic diversity and population structure of vegetable soybean (Glycine max (L.) Merr.) in China as revealed by SSR markers. Dong, Dekun,Fu, Xujun,Yuan, Fengjie,Zhu, Shenlong,Li, Baiquan,Yang, Qinghua,Yu, Xiaomin,Zhu, Danhua,Chen, Pengyin. 2014

[6]Genetic diversity and population structure of common bean (Phaseolus vulgaris) landraces from China revealed by a new set of EST-SSR markers. Xu, Shengchun,Hu, Qizan,Liu, Na,Ye, Lingwei,Gong, Yaming,Wang, Guofu,Mao, Weihua.

[7]Genetic variations within a collection of anthuriums unraveled by morphological traits and AFLP markers. Ge, Yaying,Zhang, Fei,Shen, Xiaolan,Yu, Yongming,Pan, Xiaoyun,Liu, Xiaojing,Liu, Jianxin,Pan, Gangmin,Tian, Danqing.

[8]Genetic Structure and Eco-Geographical Differentiation of Cultivated Keng Rice (Oryza sativa L. subsp japonica) in China Revealed by Microsatellites. Zhang Dong-ling,Wang Mei-xing,Qi Yong-wen,Sun Jun-li,Wang Feng-mei,Li Jin-jie,Zhang Hong-liang,Li Zi-chao,Wang Mei-xing,Qi Yong-wen,Sun Jun-li. 2012

[9]Development of Genic Simple Sequence Repeat Panels for Population Classification of Chinese Cymbidium Species. Li, Xiaobai,Xie, Ming,Jin, Liang,Li, Xiaobai,Li, Weirui,Di, Chenlu,Wu, Dianxing,Huang, Cheng.

[10]Genome wide linkage disequilibrium in Chinese asparagus bean (Vigna. unguiculata ssp. sesquipedialis) germplasm: Implications for domestication history and genome wide association studies. Xu, P.,Wu, X.,Wang, B.,Liu, Y.,Lu, Z.,Wang, S.,Li, G.,Luo, J.,Ehlers, J. D.,Close, T. J.,Roberts, P. A..

[11]Structural characterization and applications of ITS2 from rice leaffolders Cnaphalocrocis medinalis and Marasmia patnalis (Lepidoptera: Pyralidae). Yang, Yajun,Wu, Zhihong,Xu, Hongxing,Zheng, Xusong,Lu, Zhongxian. 2017

[12]Genetic diversity and relationships among 47 loquat varieties revealed by EST-SSR markers. Li, Xiao-ying,Xu, Hong-xia,Chen, Jun-wei. 2013

[13]Development of 107 SSR markers from whole genome shotgun sequences of Chinese bayberry (Myrica rubra) and their application in seedling identification. Jia, Hui-min,Shen, Yu-tong,Jiao, Yun,Dong, Xiao,Jia, Hui-juan,Du, Fang,Gao, Zhong-shan,Wang, Guo-yun,Liang, Sen-miao,Zhou, Chao-chao,Mao, Wei-hua. 2014

[14]Genetic Diversity Analysis of Faba Bean (Vicia faba L.) Based on EST-SSR Markers. Gong Ya-ming,Xu Sheng-chun,Hu Qi-zan,Zhang Gu-wen,Ding Ju,Mao Wei-hua,Li Ze-yun. 2011

[15]Development of EST-SSR markers to study genetic diversity in hyacinth bean (Lablab purpureus L.). Zhang, Guwen,Xu, Shengchun,Gong, Yaming,Hu, Qizan,Mao, Weihua. 2013

[16]Genetic evidence of local adaption and long distance migration in Blumeria graminis f. sp hordei populations from China. Zhu, Jinghuan,Shang, Yi,Hua, Wei,Wang, Junmei,Jia, Qiaojun,Yang, Jianming,Zhou, Yijun,Liu, Mengdao.

[17]Isolation and characterization of putative functional long terminal repeat retrotransposons in the Pyrus genome. Jiang, Shuang,Sun, Yongwang,Teng, Yuanwen,Jiang, Shuang,Cai, Danying,Sun, Yongwang,Teng, Yuanwen,Sun, Yongwang,Teng, Yuanwen. 2016

[18]Assessment of genetic diversity by simple sequence repeat markers among forty elite varieties in the germplasm for malting barley breeding. Wang, Jun-mei,Yang, Jian-ming,Zhu, Jing-huan,Jia, Qiao-jun,Tao, Yue-zhi. 2010

[19]Evaluation of genetic diversity in self-incompatible broccoli DH lines assessed by SRAP markers. Yu, Huifang,Zhao, Zhenqing,Sheng, Xiaoguang,Wang, Jiansheng,Gu, Honghui. 2011

[20]Development and polymorphism of Vigna unguiculata ssp unguiculata microsatellite markers used for phylogenetic analysis in asparagus bean (Vigna unguiculata ssp sesquipedialis (L.) Verdc.). Xu, Pei,Wu, Xiaohua,Wang, Baogen,Liu, Yonghua,Hu, Tingting,Lu, Zhongfu,Li, Guojing,Qin, Dehui,Ehlers, Jeffery D.,Close, Timothy J.. 2010

作者其他论文更多>>

Genetic Diversity of HMW-GS and the Correlation of Grain Quality Traits in Bread Wheat (Triticum aestivum L.) in Hubei Province, China

作者：Wang, Xiaofang;Hua, Wei;Wang, Qifei;Gao, Song;Zhu, Jinghuan;Wang, Xiaofang;An, Yue;Chen, Junpeng;Wang, Mengwei;Wang, Chengyang;Ren, Xifeng;Zhang, Daorong;Ling, Dong

关键词：wheat; HMW-GS; allelic combinations; genetic diversity; grain quality traits
Physiological, Epigenetic, and Transcriptome Analyses Provide Insights into the Responses of Wheat Seedling Leaves to Different Water Depths under Flooding Conditions

作者：Li, Bo;Zhang, Shuo;Zhu, Zhanwang;Guo, Ying;Jiao, Chunhai;Xu, Yanhao;Li, Bo;Zhang, Shuo;Zhu, Zhanwang;Guo, Ying;Jiao, Chunhai;Xu, Yanhao;Hua, Wei;Xu, Le;Yang, Caixian;Zhou, Meixue

关键词：Triticum aestivum L.; DNA methylation; transcriptional analysis; water depth; flooding stress
A splicing site change between exon 5 and 6 of the nuclear-encoded chloroplast-localized HvYGL8 gene results in reduced chlorophyll content and plant height in barley

作者：Xia, Xue;Liu, Lei;Cai, Kangfeng;Song, Xiujuan;Yue, Wenhao;Wang, Junmei;Xia, Xue;Liu, Lei;Cai, Kangfeng;Song, Xiujuan;Yue, Wenhao;Wang, Junmei;Xia, Xue;Song, Xiujuan

关键词：UMP kinase; chloroplast development; chlorophyll biosynthesis; gibberellic acid; cellulose synthase; retrograde signaling pathways
Genome-Wide Association Study for Fusarium Head Blight Resistance in Common Wheat from China

作者：Shi, Chaonan;Chao, Huaiyu;Suo, Yongqiang;Chen, Zeyu;Li, Zhikang;Lan, Caixia;Shi, Chaonan;Sun, Xiaonan;Ma, Lin;Li, Jiaqi;Ren, Yan;Chen, Feng;Hua, Wei

关键词：Fusarium head blight; genome-wide association study; resistance locus; haplotype analysis
Virulence Variability and Genetic Diversity in Blumeria graminis f. sp. hordei in Southeastern and Southwestern China

作者：Wang, Yanyu;Zhang, Guoxin;Wang, Fengtao;Lang, Xiaowei;Zhao, Xiaoqian;Hu, Chaoyue;Liu, Haifeng;Ma, Ting;Niu, Yi;Wang, Zhaodi;Feng, Jing;Lin, Ruiming;Wang, Yanyu;Wang, Yanyu;Zhu, Jinghuan;Hu, Jinghuang;Zhang, Yanxia;Yao, Xiaobo

关键词：barley; China; near-isogenic lines; pathogen diversity; powdery mildew; virulence variability
Genome-wide identification, expression pattern and genetic variation analysis of SWEET gene family in barley reveal the artificial selection of HvSWEET1a during domestication and improvement

作者：Yue, Wenhao;Cai, Kangfeng;Xia, Xue;Liu, Lei;Wang, Junmei;Yue, Wenhao;Cai, Kangfeng;Xia, Xue;Liu, Lei;Wang, Junmei;Xia, Xue

关键词：barley; SWEET; expression profile; haplotype; domestication
Fine mapping of powdery mildew resistance gene MlWE74 derived from wild emmer wheat (Triticum turgidum ssp. dicoccoides) in an NBS-LRR gene cluster

作者：Zhu, Keyu;Li, Miaomiao;Dong, Lingli;Wu, Qiuhong;Chen, Yongxing;Xie, Jingzhong;Lu, Ping;Guo, Guanghao;Zhang, Huaizhi;Zhang, Panpan;Li, Beibei;Li, Wenling;Dong, Lei;Liu, Zhiyong;Zhu, Keyu;Guo, Guanghao;Zhang, Huaizhi;Zhang, Panpan;Li, Beibei;Li, Wenling;Dong, Lei;Liu, Zhiyong;Wu, Haibin;Zhang, Deyun;Wang, Qifei;Zhu, Jinghuan;Hua, Wei;Hu, Wenli;Guo, Liqiao;Wang, Rongge;Yuan, Chengguo;Li, Hongjie

关键词：

A study of genetic diversity of colored barley (Hordeum vulgare L.) using SSR markers

作者其他论文更多>>

Genetic Diversity of HMW-GS and the Correlation of Grain Quality Traits in Bread Wheat (Triticum aestivum L.) in Hubei Province, China

Physiological, Epigenetic, and Transcriptome Analyses Provide Insights into the Responses of Wheat Seedling Leaves to Different Water Depths under Flooding Conditions

A splicing site change between exon 5 and 6 of the nuclear-encoded chloroplast-localized HvYGL8 gene results in reduced chlorophyll content and plant height in barley

Genome-Wide Association Study for Fusarium Head Blight Resistance in Common Wheat from China

Virulence Variability and Genetic Diversity in Blumeria graminis f. sp. hordei in Southeastern and Southwestern China

Genome-wide identification, expression pattern and genetic variation analysis of SWEET gene family in barley reveal the artificial selection of HvSWEET1a during domestication and improvement

Fine mapping of powdery mildew resistance gene MlWE74 derived from wild emmer wheat (Triticum turgidum ssp. dicoccoides) in an NBS-LRR gene cluster

意见箱

A study of genetic diversity of colored barley (Hordeum vulgare L.) using SSR markers

作者其他论文 更多>>

Genetic Diversity of HMW-GS and the Correlation of Grain Quality Traits in Bread Wheat (Triticum aestivum L.) in Hubei Province, China

Physiological, Epigenetic, and Transcriptome Analyses Provide Insights into the Responses of Wheat Seedling Leaves to Different Water Depths under Flooding Conditions

A splicing site change between exon 5 and 6 of the nuclear-encoded chloroplast-localized HvYGL8 gene results in reduced chlorophyll content and plant height in barley

Genome-Wide Association Study for Fusarium Head Blight Resistance in Common Wheat from China

Virulence Variability and Genetic Diversity in Blumeria graminis f. sp. hordei in Southeastern and Southwestern China

Genome-wide identification, expression pattern and genetic variation analysis of SWEET gene family in barley reveal the artificial selection of HvSWEET1a during domestication and improvement

Fine mapping of powdery mildew resistance gene MlWE74 derived from wild emmer wheat (Triticum turgidum ssp. dicoccoides) in an NBS-LRR gene cluster

意 见 箱

作者其他论文更多>>

意见箱