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Conservation genetics assessment and phylogenetic relationships of critically endangered Hucho bleekeri in China

文献类型: 外文期刊

作者: Wang, K. 1 ; Zhang, S. -H. 2 ; Wang, D. -Q. 2 ; Wu, J. -M. 2 ; Wang, C. -Y. 2 ; Wei, Q. -W. 1 ;

作者机构: 1.Nanjing Agr Univ, Wuxi Fisheries Coll, Wuxi, Peoples R China

2.Chinese Acad Fishery Sci, Yangtze River Fisheries Res Inst, 8,1st Wudayuan Rd, Wuhan 430223, Peoples R China

期刊名称:JOURNAL OF APPLIED ICHTHYOLOGY ( 影响因子:0.892; 五年影响因子:0.956 )

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收录情况: SCI

摘要: Hucho bleekeri is a critically endangered salmonid fish found in the Yangtze River drainage in China. In this study, the genetic diversity of a small population (n=43) was first assessed with partial mitochondrial DNA sequences (D-loop region and a cytochrome b gene [CYTB] gene fragment) and 15 microsatellite markers. Low levels of nucleotide diversity (Pi) were demonstrated in the H.bleekeri population based on the two mitochondrial DNA markers. The number of haplotypes (h) and the haplotype diversity (Hd) in the D-loop region (12 haplotypes and Hd=0.8208) were higher than in the CYTB gene fragment (three haplotypes and Hd=0.0941). The number of microsatellite alleles (Na) ranged from 2 to 13 in these individuals. The mean observed heterozygosity (Ho) and the expected heterozygosity (He) were 0.59719 and 0.44735, respectively. Analysis of molecular variance showed that the degree of differentiation in the population was low (F-ST=0.04041) and the coefficient of inbreeding (F-IS) was negative, indicating no obvious evidence of inbreeding in this population. A demographic assessment suggested that this species expanded a long time ago, but has suffered great losses in recent years. A molecular phylogenetic analysis clearly indicated that H.bleekeri is not introgressed by Brachymystax lenok tsinlingensis. The baseline population genetic information supplied by this study will be vital in monitoring this highly threatened species.

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