您好，欢迎访问北京市农林科学院 机构知识库！
北京市农林科学院机构知识库

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Genome-wide identification and comparative analysis of grafting-responsive mRNA in watermelon grafted onto bottle gourd and squash rootstocks by high-throughput sequencing

文献类型： 外文期刊

作者： Liu, Na 1 ; Yang, Jinghua 1 ; Fu, Xinxing 1 ; Zhang, Li 1 ; Tang, Kai 3 ; Guy, Kateta Malangisha 1 ; Hu, Zhongyuan 1 ; Gu 1 ;

作者机构： 1.Zhejiang Univ, Dept Hort, Lab Genet Resources & Funct Improvement Hort Plan, Hangzhou 310058, Zhejiang, Peoples R China

2.Zhejiang Acad Agr Sci, Inst Vegetables, Hangzhou 310021, Zhejiang, Peoples R China

3.Purdue Univ, Dept Hort & Landscape Architecture, W Lafayette, IN 47907 USA

4.Beijing Acad Agr

关键词： Grafting;Watermelon;Rootstock;RNA-Seq;Gene regulation

期刊名称：MOLECULAR GENETICS AND GENOMICS （ 影响因子：3.291； 五年影响因子：3.257 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Grafting is an important agricultural technique widely used to improve plant growth, yield, and adaptation to either biotic or abiotic stresses. However, the molecular mechanisms underlying grafting-induced physiological processes remain unclear. Watermelon (Citrullus lanatus L.) is an important horticultural crop worldwide. Grafting technique is commonly used in watermelon production for improving its tolerance to stresses, especially to the soil-borne fusarium wilt disease. In the present study, we used high-throughput sequencing to perform a genome-wide transcript analysis of scions from watermelon grafted onto bottle gourd and squash rootstocks. Our transcriptome and digital gene expression (DGE) profiling data provided insights into the molecular aspects of gene regulation in grafted watermelon. Compared with self-grafted watermelon, there were 787 and 3485 genes differentially expressed in watermelon grafted onto bottle gourd and squash rootstocks, respectively. These genes were associated with primary and secondary metabolism, hormone signaling, transcription factors, transporters, and response to stimuli. Grafting led to changes in expression of these genes, suggesting that they may play important roles in mediating the physiological processes of grafted seedlings. The potential roles of the grafting-responsive mRNAs in diverse biological and metabolic processes were discussed. Obviously, the data obtained in this study provide an excellent resource for unraveling the mechanisms of candidate genes function in diverse biological processes and in environmental adaptation in a graft system.

  • 相关文献

[1]Sweet cherry rootstock breeding program at Beijing Institute of Forestry and Pomology. Zhang, Xiaoming,Zhang, Kaichun,Yan, Guohua,Wang, Jing,Zhou, Yu.

[2]Qualities of Watermelon Juice during Shelf-life. Yu-bin WANG,Yue MA,Xiao-yan ZHAO,Chao ZHANG. 2018

[3]Qualities and Aroma of Watermelon Juice during Storage at 4℃. Yu-bin WANG,Yue MA,Xiao-yan ZHAO,Chao ZHANG. 2017

[4]Cold stress contributes to aberrant cytokinesis during male meiosis I in a wheat thermosensitive genic male sterile line. Tang, Zonghui,Yang, Di,Zhao, Changping,Zheng, Yonglian,Tang, Zonghui,Zhang, Liping,Zhao, Changping.

[5]Potential role of D-myo-inositol-3-phosphate synthase and 14-3-3 genes in the crosstalk between Zea mays and Rhizophagus intraradices under drought stress. Li, Tao,Sun, Yuqing,Xu, Lijiiao,Hu, Yajun,Hao, Zhipeng,Zhang, Xin,Li, Hong,Chen, Baodong,Ruan, Yuan,Hu, Yajun,Wang, Youshan,Yang, Liguo.

[6]Watermelon Lycopene Content Correlation with Flesh Colour and Genetic Research. Zhang, Fan,He, Hongju,Xu, Yong. 2010

[7]Colonization of Fusarium Wilt-Resistant and Susceptible Watermelon Roots by a Green-Fluorescent-Protein-tagged Isolate of Fusarium oxysporum f.sp.niveum. Lu, Guiyun,Guo, Shaogui,Zhang, Haiying,Geng, Lihua,Xu, Yong,Lu, Guiyun,Martyn, Raymond D.. 2014

[8]Genetic analysis and chromosome mapping of resistance to Fusarium oxysporum f. sp niveum (FON) race 1 and race 2 in watermelon (Citrullus lanatus L.). Ren, Yi,Jiao, Di,Gong, Guoyi,Zhang, Haiying,Guo, Shaogui,Zhang, Jie,Xu, Yong,Ren, Yi,Jiao, Di,Gong, Guoyi,Zhang, Haiying,Guo, Shaogui,Zhang, Jie,Xu, Yong,Ren, Yi,Jiao, Di,Gong, Guoyi,Zhang, Haiying,Guo, Shaogui,Zhang, Jie,Xu, Yong,Ren, Yi,Jiao, Di.

[9]Genome-wide identification, characterization, and expression analysis of the SWEET gene family in cucumber. Hu Li-ping,Zhang Feng,Song Shu-hui,Tang Xiao-wei,Xu Hui,Liu Guang-min,Wang Ya-gin,He Hong-ju,Hu Li-ping,He Hong-ju. 2017

[10]Screening for Fresh-cut Watermelon from Selected Cultivars. Cai, W. Q.. 2015

[11]An integrated genetic map based on four mapping populations and quantitative trait loci associated with economically important traits in watermelon (Citrullus lanatus). Ren, Yi,Ren, Yi,Zhang, Yan,Gong, Guoyi,Zhang, Haiying,Guo, Shaogui,Sun, Honghe,Cai, Wantao,Zhang, Jie,Xu, Yong,McGregor, Cecilia,McGregor, Cecilia. 2014

[12]Efficient CRISPR/Cas9-based gene knockout in watermelon. Tian, Shouwei,Zhang, Jie,Zong, Mei,Zhang, Haiying,Ren, Yi,Guo, Shaogui,Gong, Guoyi,Liu, Fan,Xu, Yong,Jiang, Linjian,Gao, Qiang.

[13]Comparative dynamics of ethylene production and expression of the ACS and ACO genes in normal-ripening and non-ripening watermelon fruits. Zhou, Ming,Zhou, Ming,Guo, Shaogui,Zhang, Jie,Zhang, Haiying,Li, Changbao,Tang, Xiaowei,Ren, Yi,Gong, Guoyi,Xu, Yong.

[14]Inheritance of sex forms in watermelon (Citrullus lanatus). Ji, Gaojie,Gao, Junping,Shen, Huolin,Zhang, Jie,Gong, Guoyi,Shi, Jianting,Zhang, Haiying,Ren, Yi,Guo, Shaogui,Xu, Yong.

[15]Transcriptome Analysis of Sucrose Metabolism during Bulb Swelling and Development in Onion (Allium cepa L.). Zhang, Chunsha,Zhang, Hongwei,Liang, Yi,Zhan, Zongxiang,Liu, Bingjiang,Chen, Zhentai. 2016

[16]Uncovering Male Fertility Transition Responsive miRNA in a Wheat Photo-Thermosensitive Genic Male Sterile Line by Deep Sequencing and Degradome Analysis. Bai, Jian-Fang,Wang, Yu-Kun,Wang, Peng,Duan, Wen-Jing,Yuan, Shao-Hua,Sun, Hui,Yuan, Guo-Liang,Ma, Jing-Xiu,Wang, Na,Zhang, Feng-Ting,Zhang, Li-Ping,Zhao, Chang-Ping,Bai, Jian-Fang,Wang, Yu-Kun,Wang, Peng,Duan, Wen-Jing,Yuan, Shao-Hua,Sun, Hui,Yuan, Guo-Liang,Ma, Jing-Xiu,Wang, Na,Zhang, Feng-Ting,Zhang, Li-Ping,Zhao, Chang-Ping,Wang, Peng,Duan, Wen-Jing. 2017

[17]Exploring differentially expressed genes associated with fertility instability of S-type cytoplasmic male-sterility in maize by RNA-seq. Su Ai-guo,Song Wei,Shi Zi,Zhao Yan-xin,Xing Jin-feng,Zhang Ru-yang,Li Chun-hui,Luo Mei-jie,Wang Ji-dong,Zhao Jiu-ran. 2017

作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：北京市农林科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台