您好,欢迎访问中国水产科学研究院 机构知识库!

Characterization of the mitochondrial genome of the Whitefin trevally Carangoides equula (Perciformes: Carangidae): a novel initiation codon for ATP6 gene

文献类型: 外文期刊

作者: Zou, Keshu 1 ; Li, Min 1 ;

作者机构: 1.Chinese Acad Fishery Sci, South China Sea Fisheries Res Inst, Guangzhou, Guangdong, Peoples R China

2.Shanghai Ocean Univ, Coll Fisheries & Life Sci, Shanghai, Peoples R China

3.Minist Agr, Sci Observing & Expt Stn South China Sea Fishery, Guangzhou, Guangdong, Peoples R China

关键词: Carangidae;Carangoides equula;mitochondrial genome

期刊名称:MITOCHONDRIAL DNA PART A ( 影响因子:1.514; 五年影响因子:0.707 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: She complete mitochondrial genome sequence of Carangoides equula (Perciformes: Carangidae) was determined. The size of the genome was 16,588 bp and overall base compositions of the sequence were 26.3% of A, 30.3% of C, 25.3% of T and 18.1% of G, showing,an obvious anti G bias commonly observed in teleosts. The genome contained 13 protein-Koding genes, 22 tRNA genes, 2 rRNA genes, and 2 non-coding regions (the control region and the light strand replication origin). Gene organization and gene order wassimilar to that pserved in most other vertebrates. The initiation codon GTG was detected in the open reading femes of ATPase subunit 6, which was novel for ATP6 gene in Carangidae species, pie mitogenome of C. equula shared 84.1% and 84.0% sequence similarity with two other jfmangoides species Carangoides malabaricus and Carangoides armatus, respectively, pe complete mitogenome sequence data of C. equula could provide useful information for taxonomic and phylogenetics studies.

  • 相关文献

[1]Mitochondrial genome of the Torpedo scad Megalaspis cordyla (Perciformes: Carangidae): genome characterization and phylogenetic consideration. Li, Min,Li, Yufang,Chen, Zuozhi,Li, Min,Li, Yufang. 2016

[2]Organization and characterization of the mitochondrial genome of the Razorbelly scad Alepes kleinii (Perciformes: Carangidae). Li, Min,Zou, Keshu,Li, Min,Zou, Keshu. 2016

[3]Characterization of the mitochondrial genome of the Malabar trevally Carangoides malabaricus and related phylogenetic analyses. Li, Min,Huang, Zirong,Chen, Zuozhi,Li, Min.

[4]Complete mitochondrial genome of the bigeye scad Selar crumenophthalmus (Perciformes: Carangidae). Li, Min,Chen, Zuozhi,Zou, Keshu,Li, Min,Zou, Keshu.

[5]Whole mitogenome of the Japanese scad Decapterus maruadsi (Perciformes: Carangidae). Li, Min,Chen, Zuozhi,Chen, Tao,Xiong, Dan,Fan, Jiangtao,Liang, Peiwen,Li, Min,Xiong, Dan.

[6]Complete mitochondrial genome of the African pompano Alectis ciliaris (Perciformes: Carangidae). Li, Yufang,Chen, Zuozhi,Zhang, Peng,Liang, Peiwen,Chen, Sen,Guo, Yihui,Li, Min,Li, Yufang,Li, Min.

[7]Characterization of the mitochondrial genome of the Shortfin scad Decapterus macrosoma (Perciformes: Carangidae). Li, Min,Zhang, Peng,Sun, Dianrong,Chen, Tao,Fan, Jiangtao,Zou, Keshu,Chen, Zuozhi,Li, Min,Zou, Keshu.

[8]Description of the mitochondrial genome of yellowtail scad Atule mate (Perciformes: Carangidae). Li, Min,Li, Yufang,Chen, Zuozhi,Li, Min,Li, Yufang,Chen, Zuozhi. 2016

[9]Complete mitochondrial genome of Florida pompano Trachinotus carolinus (Teleostei, Carangidae). Zhang, Dianchang,Wang, Long,Guo, Huayang,Ma, Zhenhua,Zhang, Nan,Jiang, Shigui,Zhang, Dianchang,Jiang, Shigui,Wang, Long,Lin, Junda.

[10]Mitochondrial genome of the Mackerel scad Decapterus macarellus (Perciformes: Carangidae). Zou, Keshu,Chen, Zuozhi,Zhang, Peng,Li, Min,Zou, Keshu,Li, Min.

[11]The complete mitochondrial genome of longfin yellowtail S. rivoliana (Perciformes: Carangidae). Chen, Zuozhi,Li, Yufang,Liang, Peiwen,Li, Min,Chen, Zuozhi,Li, Min.

[12]Seasonal variations in diversity and abundance of surface ichthyoplankton in the northern South China Sea. Li Kaizhi,Yin Jianqiang,Huang Liangmin,Lin Zhaojin. 2014

[13]The complete mitochondrial genome of snubnose pompano Trachinotus blochii (Teleostei, Carangidae). Zhang, Dianchang,Wang, Long,Guo, Huayang,Ma, Zhenhua,Jiang, Shigui,Zhang, Dianchang,Jiang, Shigui,Wang, Long.

[14]The complete mitochondrial genome of the Endangered Hucho bleekeri ( Salmonidae: huchen). Zhang, Shuhuan,Wei, Qiwei,Du, Hao,Li, Luoxin. 2016

[15]The complete mitochondrial genome sequence of Sarcochellichthys lacustris (Dybowski). Wu, Jing,Cao, Dingchen,Lv, Weihua,Zheng, Xianhu,Sun, Xiaowen,Wu, Jing. 2015

[16]Complete mitochondrial genome of the kawakawa tuna Euthynnus affinis. Li, Mingming,Guo, Liang,Yang, Sen,Chen, Xinghan,Meng, Zining,Lin, Haoran,Zhang, Heng. 2016

[17]Characterization of the complete mitochondrial genome of Oxygymnocypris stewartii (Cypriniformes: Cyprinidae). Ji, Wei,Zhang, Gui-Rong,Wei, Kai-Jian,Guo, Shan-Shan,Guo, Xiang-Zhao,Ji, Wei,Zhang, Gui-Rong,Wei, Kai-Jian,Guo, Shan-Shan,Guo, Xiang-Zhao,Wei, Qi-Wei. 2015

[18]Characterization of the complete mitochondrial genome of the hybrid Epinephelus moara female xEpinephelus lanceolatus male, and phylogenetic analysis in subfamily epinephelinae. Gao, Fengtao,Zhu, Ying,Yang, Guanpin,Gao, Fengtao,Wei, Min,Zhu, Ying,Guo, Hua,Chen, Songlin,Wei, Min. 2017

[19]The complete mitochondrial genome of Shizothorax grahami (Cypriniformes: Cyprinidae). Zheng, Zonglin,Yu, Ermeng,Li, Zhifei,Ou, Hongxia,Wang, Guangjun. 2016

[20]The complete mitochondrial genome of Arius arius (Siluriformes: Ariidae). Wang, Pengfei,Ou, Youjun,Wen, Jiufu,Li, Jia'er. 2016

作者其他论文 更多>>