文献类型： 外文期刊
作者： Wang, Yunxiang 1 ; Wang, Qing 1 ; Gao, Lipu 1 ; Zhu, Benzhong 2 ; Luo, Yunbo 3 ; Deng, Zhiping; Zuo, Jinhua 1 ;
作者机构： 1.Beijing Acad Agr & Forestry Sci, Beijing Vegetable Res Ctr,Key Lab Vegetable Posth, Minist Agr,Beijing Key Lab Fruits & Vegetable Sto, Key Lab Urban Agr,Key Lab Biol & Genet Improvemen, Beijing, Peoples R China
2.China Agr Univ, Coll Food Sci & Nutr Engn, Dept Food Biotechnol, Lab Postharvest Mol Biol Fruits & Vegetable, Beijing 100083, Peoples R China
3.China Agr Univ, Coll Food Sci & N
期刊名称：PHYSIOLOGIA PLANTARUM （ 影响因子：4.5； 五年影响因子：4.576 ）
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收录情况： SCI
摘要： Circular RNAs (circRNAs) are a large class of non-coding endogenous RNAs that could act as competing endogenous RNAs (ceRNAs) to terminate the mRNA targets' suppression of miRNAs. To elucidate the intricate regulatory roles of circRNAs in the ethylene pathway in tomato fruit, deep sequencing and bioinformatics methods were performed. After strict screening, a total of 318 circRNAs were identified. Among these circRNAs, 282 were significantly differentially expressed among wild-type and sense-/antisense-LeERF1 transgenic tomato fruits. Besides, 1254 target genes were identified and a large amount of them were found to be involved in ethylene pathway. In addition, a sophisticated regulatory model consisting of circRNAs, target genes and ethylene was set up. Importantly, 61 circRNAs were found to be potential ceRNAs to combine with miRNAs and some of the miRNAs had been revealed to participate in the ethylene signaling pathway. This research further raised the possibility that the ethylene pathway in tomato fruit may be under the regulation of various circRNAs and provided a new perspective of the roles of circRNAs.
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