Genome-wide identification, characterization, and expression analysis of SnRK2 family in Hevea brasiliensis
文献类型: 外文期刊
作者: Guo, Dong 1 ; Li, Hui-Liang 1 ; Zhu, Jia-Hong 1 ; Wang, Ying 1 ; An, Feng 2 ; Xie, Gui-Shui 2 ; Peng, Shi-Qing 1 ;
作者机构: 1.Chinese Acad Trop Agr Sci, Key Lab Trop Crop Biotechnol, Minist Agr, Inst Trop Biosci & Biotechnol, Haikou 571101, Hainan, Peoples R China
2.Chinese Acad Trop Agr Sci, Rubber Res Inst, Danzhou Invest & Expt Stn Trop Crops, Minist Agr, Danzhou 571737, Hainan, Peoples R China
关键词: Hevea brasiliensis;SnRK2 family;Abscisic acid
期刊名称:TREE GENETICS & GENOMES ( 影响因子:2.297; 五年影响因子:2.547 )
ISSN:
年卷期:
页码:
收录情况: SCI
摘要: The sucrose non-fermenting 1-related protein kinase 2 (SnRK2) gene family belongs to a group of plant-specific serine/threonine kinase family involved in abscisic acid (ABA) signaling and biotic and abiotic stress response. Although genome-wide analyses of the SnRK2 gene family have been conducted in some species, little is known about the SnRK2 gene family in rubber tree (Hevea brasiliensis). In this study, we identified 10 SnRK2s designated as HbSnRK2.1 to HbSnRK2.10 in the rubber tree genome. The subsequently constructed phylogenetic tree demonstrated that HbSnRK2s have three subfamilies that correlate well with those of Arabidopsis sp. and rice subfamilies. All SnRK2 genes contained nine exons and eight introns. Although the C-terminus was divergent, eight conserved motifs were found. Motifs 1-6 were common to allHbSnRK2s. Expression analysis results showed that 7 of the 10 HbSnRK2s were highly expressed in latex. HbSnRK2.7 was predominantly expressed and simultaneously regulated by abscisic acid, jasmonic acid, and ethylene treatment in laticifers. HbSnRK identification and characterization provided further understanding on the role of ABA signal in the rubber tree.
- 相关文献
作者其他论文 更多>>
-
Functional Analysis of the HbREF1 Promoter from Hevea brasiliensis and Its Response to Phytohormones
作者:Chen, Lin-Tao;Tang, Yan-Qiong;Peng, Shi-Qing;Chen, Lin-Tao;Guo, Dong;Zhu, Jia-Hong;Wang, Ying;Li, Hui-Liang;Peng, Shi-Qing;Guo, Dong;Zhu, Jia-Hong;Wang, Ying;Li, Hui-Liang;Peng, Shi-Qing;An, Feng
关键词:Hevea brasiliensis; rubber elongation factor; promoter; transcriptional regulation; phytohormone
-
Reprogramming of DNA methylation and changes of gene expression in grafted Hevea brasiliensis
作者:Li, Hui-Liang;Wang, Ying;Guo, Dong;Zhu, Jia-Hong;Wang, Yu;Dai, Hao-Fu;Peng, Shi-Qing;Li, Hui-Liang;Wang, Ying;Guo, Dong;Zhu, Jia-Hong;Wang, Yu;Dai, Hao-Fu;Peng, Shi-Qing;Li, Hui-Liang;Guo, Dong;Zhu, Jia-Hong;Wang, Yu;Li, Hui-Liang;Guo, Dong;Zhu, Jia-Hong;Wang, Yu;Li, Hui-Liang;Wang, Yu
关键词:Hevea brasiliensis; grafting; whole genome bisulfite sequencing; DNA methylation; gene expression
-
The chromosome-scale reference genome of mirid bugs (Adelphocoris suturalis) genome provides insights into omnivory, insecticide resistance, and survival adaptation
作者:Xu, Zhongping;Wang, Guanying;Zhu, Mingju;Wang, Ying;Zhang, Guangyu;Zhang, Can;Zhou, Yi;Yuan, Daojun;Chen, Taiyu;Ma, Weihua;Zhang, Xianlong;Jin, Shuangxia;Luo, Jing;Hu, Lisong;Liang, Sijia;Li, Bo;Huang, Xingxing;Chen, Lizhen;Gao, Wei;Lindsey, Keith;Ding, Fang
关键词:Adelphocoris suturalis; Chromosome-scale reference genome; Candidate effectors; Omnivory; Detoxification
-
Genomic insight into domestication of rubber tree
作者:Chao, Jinquan;Wu, Shaohua;Shi, Minjing;Yang, Shuguang;Zhang, Shixin;Deng, Xiaomin;Gao, Xinsheng;Zhang, Xiaofei;Hu, Yanshi;Zeng, Xia;Li, Weiguo;Tian, Wei-Min;Chao, Jinquan;Wu, Shaohua;Shi, Minjing;Yang, Shuguang;Zhang, Shixin;Deng, Xiaomin;Huang, Xiao;Gao, Xinsheng;Zhang, Xiaofei;Hu, Yanshi;Zeng, Xia;Li, Weiguo;Wu, Jilin;Hao, Bingzhong;Tian, Wei-Min;Chao, Jinquan;Wu, Shaohua;Shi, Minjing;Yang, Shuguang;Zhang, Shixin;Li, Yan;Deng, Xiaomin;Huang, Xiao;Gao, Xinsheng;Zhang, Xiaofei;Hu, Yanshi;Zeng, Xia;Li, Weiguo;Wu, Jilin;Hao, Bingzhong;Tian, Wei-Min;Xu, Xia;Du, Huilong;Fan, Xiuli;Hai, Chunyan;Kou, Liquan;Yu, Hong;Li, Jiayang;Liang, Chengzhi;Gao, Qiang;Zhang, Liangsheng;Gao, Qiang;Du, Huilong;Du, Huilong;Fan, Xiuli;Hai, Chunyan;Li, Jiayang;Liang, Chengzhi;Gao, Bin;Guo, Dong;Peng, Shiqing;Zhang, Jiao;Wang, Zhiwei;Li, Yan;Xue, Wenbo;Xu, Jiang;Wang, Xuchu;Li, Jiayang
关键词:
-
Comparative Transcriptome and Metabolome Analysis of Rubber Trees (Hevea brasiliensis Muell. Arg.) Response to Aluminum Stress
作者:Ma, Xiaowei;Cheng, Linlin;Peng, Wentao;Xie, Guishui;Yang, Zongming;An, Feng;Ma, Xiaowei;Liu, Zifan;Yang, Zongming;Wang, Ying
关键词:aluminum; abiotic stress; Hevea brasiliensis; RNA-seq; metabolites; organic acids; detoxification
-
14-3-3 Proteins Participate in Regulation of Natural Rubber Biosynthesis in Hevea brasiliensis
作者:Zhang, Miao;Yang, Ziping;Guo, Dong;Li, Huiliang;Zhu, Jiahong;Peng, Shiqing;Wang, Ying;Zhang, Miao;Yang, Ziping
关键词:Hevea brasiliensis; 14-3-3 proteins; HbGF14c; HbSRPP; natural rubber biosynthesis
-
Genome-Wide Survey of the RWP-RK Gene Family in Cassava (Manihot esculenta Crantz) and Functional Analysis
作者:Lin, Chenyu;Guo, Xin;Yu, Xiaohui;Lin, Chenyu;Li, Shuxia;Li, Wenbin;Yu, Xiaoling;Zhao, Pingjuan;Ruan, Mengbin;An, Feng
关键词:cassava; nodule inception-like proteins; RWP-RK domain proteins; abiotic stress; phylogenetic relationships; gene expression patterns; nitrogen starvation