您好,欢迎访问中国水产科学研究院 机构知识库!

Low mtDNA variation and shallow population structure of the Chinese pomfret Pampus chinensis along the China coast

文献类型: 外文期刊

作者: Sun, P. 1 ; Tang, B. J. 1 ;

作者机构: 1.Chinese Acad Fishery Sci, East China Sea Fisheries Res Inst, Key Lab Marine & Estuarine Fisheries, Minist Agr, Shanghai 200090, Peoples R China

关键词: cytochrome b;genetic differentiation;genetic diversity;mtDNA;Pampus chinensis

期刊名称:JOURNAL OF FISH BIOLOGY ( 影响因子:2.051; 五年影响因子:2.25 )

ISSN: 0022-1112

年卷期: 2018 年 92 卷 1 期

页码:

收录情况: SCI

摘要: In the present study, population genetic structure and genetic diversity of the Chinese pomfret Pampus chinensis, along the China coast were investigated and compared with that from Indonesia using mitochondrial DNA cytochrome b gene sequences. A total of 28 variable sites (including 18 singleton sites and 10 parsimony information sites) were observed and 23 haplotypes were defined in 330 individuals from 11 localities. The haplotype diversity (H-D) of the populations ranged from 0540 to 0828, the nucleotide diversity () ranged from 0081 to 0295%. Pairwise F-ST statistics showed that significant genetic divergence occurred among populations from different geographical regions. The high dispersal capabilities, geographic segregation and ocean currents may be responsible for the present population genetic structure in this species. In addition, a population expansion event during the late Pleistocene period was inferred. The time of population expansion was estimated to occur about 117000-169000years ago.

  • 相关文献

[1]PCR-RFLP analysis of cytochrome b gene does not support Coilia ectenes taihuensis being a subspecies of Coilia ectenes. Cheng, QQ,Lu, DR.

[2]Selection pressures have driven population differentiation of domesticated and wild common carp (Cyprinus carpio L.). Xu, L. H.,Wang, C. H.,Wang, J.,Ma, Y. Q.,Yang, X. X.,Dong, Z. J.. 2012

[3]Genetic variation of Coilia ectenes (Clupeiformes: Engraulidae) revealed by the complete cytochrome b sequences of mitochondrial DNA. Ma, Chunyan,Cheng, Qiqun,Zhang, Qingyi,Zhuang, Ping,Ma, Chunyan,Zhao, Yunlong,Zhang, Qingyi.

[4]Population genetic structure and demographic history of Pampus argenteus in the Indo-West Pacific inferred from mitochondrial cytochrome b sequences. Sun, Peng,Shi, Zhaohong,Yin, Fei,Peng, Shiming.

[5]Genetic diversity and population structure of Schizopygopsis younghusbandi Regan in the Yarlung Tsangpo River inferred from mitochondrial DNA sequence analysis. Guo, Shan-Shan,Zhang, Gui-Rong,Guo, Xiang-Zhao,Wei, Kai-Jian,Yang, Rui-Bin,Guo, Shan-Shan,Zhang, Gui-Rong,Guo, Xiang-Zhao,Wei, Kai-Jian,Yang, Rui-Bin,Wei, Qi-Wei.

[6]Population genetic diversity of mud crab (Scylla paramamosain) in Hainan Island of China based on mitochondrial DNA. Ma, Hongyu,Ma, Chunyan,Ma, Lingbo.

[7]Genetic diversity and population structure of Portunus sanguinolentus (Herbst, 1783) revealed by mtDNA COI sequences. Ren, Guijing,Ma, Hongyu,Ma, Chunyan,Wang, Wei,Chen, Wei,Ma, Lingbo,Ma, Hongyu.

[8]Genetic variation in wild and cultured populations of the pearl oyster Pinctada fucata from southern China. Yu, Da Hui,Chu, Ka Hou. 2006

[9]Genetic diversity and relationship of Mauremys mutica and M-annamensis assessed by DNA barcoding sequences. Zhao, Jian,Li, Wei,Wen, Ping,Zhang, Dandan,Zhu, Xinping,Zhao, Jian,Wen, Ping. 2016

[10]Analysis of Genetic Diversity and Differentiation of Seven Stocks of Litopenaeus vannamei Using Microsatellite Markers. Zhang Kai,Zhang Quanqi,Wang Weiji,Li Weiya,Kong Jie,Li Weiya. 2014

[11]The loss of genetic diversity during captive breeding of the endangered sculpin, Trachidermus fasciatus, based on ISSR markers: implications for its conservation. Bi Xiaoxiao,Yang Qiaoli,Gao Tianxiang,Li Chuangju. 2011

[12]High genetic diversity and low differentiation in mud crab (Scylla paramamosain) along the southeastern coast of China revealed by microsatellite markers. Ma, Hongyu,Cui, Haiyu,Ma, Chunyan,Ma, Lingbo.

[13]The complete mitochondrial genome sequence of Pampus chinensis (Perciformes: Stromateidae). Sun, Dandan,Cheng, Qiqun,Qiao, Huiying,Zhang, Heng,Chen, Ying,Sun, Dandan,Qiao, Huiying,Chen, Ying.

[14]Genetic variation and evolutionary demography of Fenneropenaeus chinensis populations, as revealed by the analysis of mitochondrial control region sequences. Kong, Xiao Yu,Li, Yu Long,Li, Yu Long,Shi, Wei,Kong, Jie. 2010

[15]The carp-goldfish nucleocytoplasmic hybrid has mitochondria from the carp as the nuclear donor species. Hu Guangfu,Zou Guiwei,Liang Hongwei,Li Zhong,Hu Shaona,Hu Guangfu,Liu Xiangjiang.

[16]Genetic diversity and historical demography of Chinese shrimp Feneropenaeus chinensis in Yellow Sea and Bohai Sea based on mitochondrial DNA analysis. Li, Yu Long,Kong, Xiao Yu,Yu, Zi Niu,Li, Yu Long,Ma, Shen,Chen, Li Mei,Kong, Jie. 2009

[17]Scylla paramamosain (Estampador) the most common mud crab (Genus Scylla) in China: evidence from mtDNA. Ma, Ling-Bo,Zhang, Feng-Ying,Ma, Chun-Yan,Qiao, Zhen-Guo. 2006

[18]Comparison of the northern snakehead (Channa argus) and blotched snakehead (Channa maculata) and their reciprocal hybrids (C. maculata, female x C. argus male and C. argus, female x C. maculata male) based on complete mitochondrial DNA sequences. Zhang Xincheng,Zhu Xinping,Chen Kunci,Zhao Jian,Luo Qing,Hong Xiaoyou,Zhang Xincheng,Zhu Xinping,Chen Kunci,Zhao Jian. 2015

[19]Mitochondrial DNA variation in the East China Sea and Yellow Sea populations of swimming crab Ovalipes punctatus. Zheng, Wei,Han, Zhiqiang,Yu, Cungen,Han, Zhiqiang,Chen, Guobao,Gao, Tianxiang. 2015

[20]Phylogenetic relationships of 12 Penaeoidea shrimp species deduced from mitochondrial DNA sequences. Quan, JX,Zhuang, ZM,Deng, JY,Dai, JX,Zhang, YP. 2004