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Assembly and annotation of whole-genome sequence of Fusarium equiseti

文献类型： 外文期刊

作者： Li, Xueping 1 ; Xu, Shiyang 2 ; Zhang, Jungao 3 ; Li, Minquan 1 ;

作者机构： 1.Gansu Acad Agr Sci, Inst Plant Protect, Lanzhou 730070, Peoples R China

2.Gansu Agr Univ, Coll Prataculture, Lanzhou 730070, Peoples R China

3.Xinjiang Acad Agr Sci, Res Inst Nucl Technol & Biotechnol, Urumqi 830091, Peoples R China

关键词： Fusarium; Phylogeny; Zearalenone; Trichothecene; Whole-genome sequencing

期刊名称：GENOMICS （ 影响因子：5.736； 五年影响因子：4.939 ）

ISSN： 0888-7543

年卷期： 2021 年 113 卷 4 期

页码：

收录情况： SCI

摘要： Fusarium equiseti is a plant pathogen with a wide range of hosts and diverse effects, including probiotic effects. However, the molecular mechanisms underlying these effects remain unclear, hindering its effective utilization. The final assembly included 16 scaffolds of contiguous sequence without gaps. The total sequence length was 40,776,005 bp, and the GC content of 48.01%. In total, we annotated the putative function of 13,134 genes, accounting for 94.97% of the candidate genes. We identified two and 23 candidate genes that are likely involved in the production of mycotoxins zearalenone and trichothecene, respectively. A comparative genomic analysis supported the high quality of the F. equiseti assembly. Our comprehensive analysis of whole-genome sequence will serve as a valuable resource for future studies of expression, regulation, function and evolution of the genes of F. equiseti as well as studies into disease prevention and control.

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