Chromosome-level genome assembly of the Colorado potato beetle, Leptinotarsa decemlineata
文献类型： 外文期刊
作者： Yan, Junjie 1 ; Zhang, Chaowei 2 ; Zhang, Mengdi 1 ; Zhou, Hang 2 ; Zuo, Zhangqi 2 ; Ding, Xinhua 5 ; Zhang, Runzhi 6 ; Li, Fei 2 ; Gao, Yulin 1 ;
作者机构： 1.Chinese Acad Agr Sci, Inst Plant Protect, State Key Lab Biol Plant Dis & Insect Pests, Beijing 100193, Peoples R China
2.Zhejiang Univ, Inst Insect Sci, State Key Lab Rice Biol, Hangzhou 310058, Peoples R China
3.Zhejiang Univ, Inst Insect Sci, Minist Agr & Rural Affairs, Key Lab Mol Biol Crop Pathogens & Insects, Hangzhou 310058, Peoples R China
4.Zhejiang Univ, Inst Insect Sci, Key Lab Biol Crop Pathogens & Insects Zhejiang Pro, Hangzhou 310058, Peoples R China
5.Xinjiang Acad Agr Sci, Inst Plant Protect, Urumqi 830091, Peoples R China
6.Chinese Acad Sci, Inst Zool, Key Lab Zool Systemat & Evolut, Beijing 100101, Peoples R China
期刊名称：SCIENTIFIC DATA （ 影响因子：9.8； 五年影响因子：10.8 ）
ISSN：
年卷期： 2023 年 10 卷 1 期
页码：
收录情况： SCI
摘要： The Colorado potato beetle (Leptinotarsa decemlineata) is one of the most notorious insect pests of potatoes globally. Here, we generated a high-quality chromosome-level genome assembly of L. decemlineata using a combination of the PacBio HiFi sequencing and Hi-C scaffolding technologies. The genome assembly (-1,008 Mb) is anchored to 18 chromosomes (17 + XO), with a scaffold N50 of 58.32 Mb. It contains 676 Mb repeat sequences and 29,606 protein-coding genes. The chromosome-level genome assembly of L. decemlineata provides in-depth knowledge and will be a helpful resource for the beetle and invasive biology research communities.
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