中国水产科学研究院机构知识库

Complete mitochondrial genome of the sixbar grouper Epinephelus sexfasciatus (Perciformes: Epinephelidae)

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文献类型：外文期刊

作者： Du, Fei-Yan ¹ ; Ye, Le ¹ ; Wang, Xue-Hui ¹ ;

作者机构： 1.Chinese Acad Fishery Sci, South China Sea Fisheries Res Inst, Guangzhou 510300, Guangdong, Peoples R China

2.Minist Agr, Key Lab South China Sea Fishery Resources Exploit, Guangzhou, Guangdong, Peoples R China

关键词： Epinephelus sexfasciatus;mitogenome;phylogenetic position

期刊名称：MITOCHONDRIAL DNA （影响因子：0.925；五年影响因子：0.994 ）

ISSN： 1940-1736

年卷期： 2015 年 26 卷 3 期

页码：

收录情况： SCI

摘要： In this study, we presented the complete mitogenome for the sixbar grouper Epinephelus sexfasciatus. The complete mitogenome of E. sexfasciatus is 16,786 bp in length with the typical mitochondrial gene order and composition in vertebrates. Overall base composition was 28.40% A, 27.93% C, 27.21% T and 16.45% G. The COI gene used GTG and the ATP6 gene used CTG as the start codon. The tRNA-Ser2 lost the dihydrouridine arm and replaced with a simple loop. Both the maximum likelihood (ML) and Bayesian inference (BI) methods yielded the same tree topology using available mitogenomes of the genus Epinephelus. Epinephelus sexfasciatus was nested to E. akaara, E. awoara and E. fasciatomaculosus, and then combined with E. stictus formed a clade.

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