Genome-wide analysis and expression characteristics of Small Auxin-up RNAs genes in flax ( Linum usitatissimum L.)
文献类型: 外文期刊
作者: Bao, Yaning 1 ; Zou, Yifei 3 ; Huang, Xing 4 ; Rehman, Muzammal 5 ; Liu, Chong 1 ; Shi, Shaomin 1 ; Peng, Dingxiang 2 ; Fahad, Shah 8 ; Wang, Bo 2 ;
作者机构: 1.Guizhou Univ, Coll Tobacco Sci, Guizhou Key Lab Tobacco Qual Res, Guiyang 550025, Guizhou, Peoples R China
2.Huazhong Agr Univ, Coll Plant Sci & Technol, MOA Key Lab Crop Ecophysiol & Farming Syst Middle, Wuhan 430070, Peoples R China
3.Guizhou Acad Agr Sci, Rapeseed Res Inst, Guiyang 550025, Guizhou, Peoples R China
4.Chinese Acad Trop Agr Sci, Environm & Plant Protect Inst, Haikou 571101, Peoples R China
5.Guangxi Univ, Coll Agr, Nanning, Peoples R China
6.Guangxi Key Lab Agroenvironm & Agr Prod safety, Nanning 530004, Peoples R China
7.Key Lab Crop Genet Breeding & Germplasm Innovat, Nanning 530004, Peoples R China
8.Abdul Wali Khan Univ Mardan, Dept Agron, Khyber Pakhtunkhwa 23200, Pakistan
9.Lebanese Amer Univ, Dept Nat Sci, Byblos, Lebanon
关键词: Flax; SAUR; Auxin; Hormone treatment; Abotic stress
期刊名称:INDUSTRIAL CROPS AND PRODUCTS ( 影响因子:5.6; 五年影响因子:5.7 )
ISSN: 0926-6690
年卷期: 2024 年 217 卷
页码:
收录情况: SCI
摘要: Plant auxin is crucial in regulating many aspects of plant growth and development. Small Auxin-up RNAs ( SAURs ) genes act as the main early auxin response genes and are involved in regulating plant growth and development. Flax is a well-known fiber and oil crop; thus, our study provided a systematic bioinformatics analysis of the SAUR family in flax, including basic parameters, gene structure, chromosomal location, phylogenetic analysis, and cis - acting element analysis. Based on genomic information, 86 LusSAUR genes were identified and separated into eight groups. The gene structure analysis revealed that only two LusSAUR genes have introns. The cis -acting elements related to hormones and stress were abundant in the promoter region of LusSAUR members. Based on the gene expression oligo microarray, LusSAUR genes had tissue-specific expression characteristics in eight different tissues. Quantitative real-time PCR analysis indicated that 10 selected LusSAUR genes could be quickly upregulated following treatment with IAA. The 10 genes displayed distinctive expression levels under hormone treatment (MeJA, ABA, SA) and abiotic stress (PEG, NaCl, CdCl 2 ). This study provides a foundation for further investigations for functional analysis of LusSAURs in flax. Furthermore, it will provide useful insights for further research into the molecular mechanism of regulating hormones and environmental signals in flax growth and development.
- 相关文献
作者其他论文 更多>>
-
Macrogenomics reveal the effects of inter-cropping perilla on kiwifruit: impact on inter-root soil microbiota and gene expression of carbon, nitrogen, and phosphorus cycles in kiwifruit
作者:Gao, Ning;Zou, Yifei;Zhao, Wei;He, Yun;Zhu, Sixi;Gao, Ning;Wen, He;Shang, Zhiwei;Yang, Sen;Zhang, Heng;Qin, Jiahao;Wang, Wenhua
关键词:kiwifruit; perilla; carbon; nitrogen and phosphorus cycling genes; inter-root microorganisms; macrogenome; inter-cropping
-
Overexpression of a Ramie (Boehmaeria nivea L. Gaud) Group I WRKY Gene, BnWRKY49, Increases Drought Resistance in Arabidopsis thaliana
作者:Bao, Yaning;Bao, Yaning;Liao, Yiwen;Dai, Lunjin;Liu, Lijun;Peng, Dingxiang;Wang, Bo;Zou, Yifei;An, Xia;Huang, Xing
关键词:ramie; WRKY transcription factors; drought; salt; stomatal aperture
-
Transcriptome analysis of fiber development under high-temperature stress in flax (Linum usitatissimum L.)
作者:Bao, Yaning;Tian, Ruifeng;Liu, Lijun;Wang, Bo;Peng, Dingxiang;Bao, Yaning;Zou, Yifei;Tian, Ruifeng;Huang, Xing
关键词:Flax; High temperature stress; Bast fiber; Transcriptome
-
Isolation of two novel promoters from ramie (Boehmeria nivea L. Gaudich) and its functional characterization in Arabidopsis thaliana
作者:Guo, Pingan;Zheng, Yancheng;Chen, Jie;Wang, Bo;Liu, Lijun;Peng, Dingxiang;Feng, Enying
关键词:Ramie; Promoter; Cis-acting element; Abiotic stress